STRINGSTRING
gdhI_1 gdhI_1 fadD_1 fadD_1 fadD_2 fadD_2 GCA_000497835_00583 GCA_000497835_00583 fabF_1 fabF_1 fabD_1 fabD_1 fabG_1 fabG_1 fabF_2 fabF_2 ppsC_1 ppsC_1 lgrE_1 lgrE_1 fabA fabA fabB fabB accA accA fabZ fabZ fabG_9 fabG_9 accB_1 accB_1 accC_1 accC_1 madC madC fabD_2 fabD_2 ddl_2 ddl_2 fabV fabV lgrE_2 lgrE_2 cfiB cfiB GCA_000497835_05119 GCA_000497835_05119 accC_2 accC_2 accB_2 accB_2 accD accD fabH fabH
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gdhI_1Glucose 1-dehydrogenase 1. (248 aa)
fadD_1Long-chain-fatty-acid--CoA ligase. (562 aa)
fadD_2Long-chain-fatty-acid--CoA ligase. (565 aa)
GCA_000497835_00583Beta-ketodecanoyl-[acyl-carrier-protein] synthase. (373 aa)
fabF_13-oxoacyl-[acyl-carrier-protein] synthase 2. (429 aa)
fabD_1Malonyl CoA-acyl carrier protein transacylase. (313 aa)
fabG_13-oxoacyl-[acyl-carrier-protein] reductase FabG. (246 aa)
fabF_23-oxoacyl-[acyl-carrier-protein] synthase 2. (414 aa)
ppsC_1Plipastatin synthase subunit C. (248 aa)
lgrE_1Linear gramicidin dehydrogenase LgrE. (238 aa)
fabA3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase. (171 aa)
fabB3-oxoacyl-[acyl-carrier-protein] synthase 1. (406 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha. (315 aa)
fabZ3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ. (146 aa)
fabG_93-oxoacyl-[acyl-carrier-protein] reductase FabG. (447 aa)
accB_1Biotin carboxyl carrier protein of acetyl-CoA carboxylase. (153 aa)
accC_1Biotin carboxylase. (453 aa)
madCMalonyl-S-ACP:biotin-protein carboxyltransferase MADC. (534 aa)
fabD_2Malonyl CoA-acyl carrier protein transacylase. (308 aa)
ddl_2D-alanine--D-alanine ligase. (398 aa)
fabVEnoyl-[acyl-carrier-protein] reductase [NADH]. (398 aa)
lgrE_2Linear gramicidin dehydrogenase LgrE. (251 aa)
cfiB2-oxoglutarate carboxylase small subunit. (488 aa)
GCA_000497835_05119Hypothetical protein. (135 aa)
accC_2Biotin carboxylase. (450 aa)
accB_2Biotin carboxyl carrier protein of acetyl-CoA carboxylase. (143 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta. (306 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase 3. (307 aa)
Your Current Organism:
gamma proteobacterium L18
NCBI taxonomy Id: 1229486
Other names: g. proteobacterium L18
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