STRINGSTRING
PFICI_13767 PFICI_13767 PFICI_12392 PFICI_12392 PFICI_08066 PFICI_08066 PFICI_05432 PFICI_05432 PFICI_04195 PFICI_04195 PFICI_01503 PFICI_01503
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PFICI_13767Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1077 aa)
PFICI_12392Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (484 aa)
PFICI_08066Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (677 aa)
PFICI_05432Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (609 aa)
PFICI_04195Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family. (175 aa)
PFICI_01503Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (498 aa)
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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