STRINGSTRING
PFICI_13307 PFICI_13307 PFICI_12632 PFICI_12632 PFICI_12912 PFICI_12912 PFICI_13716 PFICI_13716 PFICI_11611 PFICI_11611 PFICI_12066 PFICI_12066 PFICI_12185 PFICI_12185 PFICI_10420 PFICI_10420 PFICI_09211 PFICI_09211 PFICI_09025 PFICI_09025 PFICI_08203 PFICI_08203 PFICI_07235 PFICI_07235 PFICI_06924 PFICI_06924 PFICI_05064 PFICI_05064 PFICI_05082 PFICI_05082 PFICI_01847 PFICI_01847 PFICI_01928 PFICI_01928
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PFICI_13307AA_TRNA_LIGASE_II domain-containing protein. (598 aa)
PFICI_12632tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (630 aa)
PFICI_12912Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (626 aa)
PFICI_13716Tyrosine--tRNA ligase. (633 aa)
PFICI_11611Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (629 aa)
PFICI_12066N-acetyltransferase domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (736 aa)
PFICI_12185Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (640 aa)
PFICI_10420Lysine--tRNA ligase. (616 aa)
PFICI_09211Leucine--tRNA ligase. (1123 aa)
PFICI_09025Isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1080 aa)
PFICI_08203Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (954 aa)
PFICI_07235Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (651 aa)
PFICI_06924Uncharacterized protein. (1249 aa)
PFICI_05064tRNA-binding domain-containing protein. (404 aa)
PFICI_05082Proline--tRNA ligase. (650 aa)
PFICI_01847Tyrosine--tRNA ligase. (407 aa)
PFICI_01928AA_TRNA_LIGASE_II domain-containing protein. (582 aa)
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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