STRINGSTRING
PFICI_15367 PFICI_15367 PFICI_15401 PFICI_15401 PFICI_15366 PFICI_15366 PFICI_15089 PFICI_15089 PFICI_15025 PFICI_15025 PFICI_14406 PFICI_14406 PFICI_15304 PFICI_15304 PFICI_13773 PFICI_13773 PFICI_13267 PFICI_13267 PFICI_13427 PFICI_13427 PFICI_13442 PFICI_13442 PFICI_13639 PFICI_13639 PFICI_13684 PFICI_13684 PFICI_13652 PFICI_13652 PFICI_12259 PFICI_12259 PFICI_12467 PFICI_12467 PFICI_13266 PFICI_13266 PFICI_12702 PFICI_12702 PFICI_12754 PFICI_12754 PFICI_12794 PFICI_12794 PFICI_12839 PFICI_12839 PFICI_12854 PFICI_12854 PFICI_13651 PFICI_13651 PFICI_12914 PFICI_12914 PFICI_12943 PFICI_12943 PFICI_13590 PFICI_13590 PFICI_12461 PFICI_12461 PFICI_11635 PFICI_11635 PFICI_11702 PFICI_11702 PFICI_12596 PFICI_12596 PFICI_11902 PFICI_11902 PFICI_12435 PFICI_12435 PFICI_12510 PFICI_12510 PFICI_12650 PFICI_12650 PFICI_12091 PFICI_12091 PFICI_12900 PFICI_12900 PFICI_10869 PFICI_10869 PFICI_10927 PFICI_10927 PFICI_10929 PFICI_10929 PFICI_11538 PFICI_11538 PFICI_11057 PFICI_11057 PFICI_11114 PFICI_11114 PFICI_11113 PFICI_11113 PFICI_11678 PFICI_11678 PFICI_11703 PFICI_11703 PFICI_11244 PFICI_11244 TIF6 TIF6 PFICI_09821 PFICI_09821 PFICI_09915 PFICI_09915 PFICI_09956 PFICI_09956 PFICI_10915 PFICI_10915 PFICI_11206 PFICI_11206 PFICI_10156 PFICI_10156 PFICI_10260 PFICI_10260 PFICI_10265 PFICI_10265 PFICI_09729 PFICI_09729 PFICI_08598 PFICI_08598 PFICI_08647 PFICI_08647 PFICI_08821 PFICI_08821 PFICI_08767 PFICI_08767 PFICI_08903 PFICI_08903 PFICI_10394 PFICI_10394 PFICI_08902 PFICI_08902 PFICI_09111 PFICI_09111 PFICI_09166 PFICI_09166 PFICI_09243 PFICI_09243 PFICI_09453 PFICI_09453 PFICI_09397 PFICI_09397 PFICI_09452 PFICI_09452 PFICI_08604 PFICI_08604 PFICI_07347 PFICI_07347 PFICI_08990 PFICI_08990 PFICI_09050 PFICI_09050 PFICI_07527 PFICI_07527 PFICI_08954 PFICI_08954 PFICI_08989 PFICI_08989 YTM1 YTM1 PFICI_09460 PFICI_09460 PFICI_07912 PFICI_07912 PFICI_09289 PFICI_09289 PFICI_07908 PFICI_07908 PFICI_09374 PFICI_09374 PFICI_07994 PFICI_07994 SPB1 SPB1 PFICI_07430 PFICI_07430 PFICI_08258 PFICI_08258 PFICI_07455 PFICI_07455 PFICI_08328 PFICI_08328 PFICI_06012 PFICI_06012 PFICI_07705 PFICI_07705 PFICI_07926 PFICI_07926 PFICI_07760 PFICI_07760 PFICI_08046 PFICI_08046 PFICI_08056 PFICI_08056 NOP7 NOP7 PFICI_06196 PFICI_06196 PFICI_08281 PFICI_08281 PFICI_06421 PFICI_06421 PFICI_06517 PFICI_06517 PFICI_06640 PFICI_06640 PFICI_06622 PFICI_06622 PFICI_05994 PFICI_05994 PFICI_08335 PFICI_08335 PFICI_06835 PFICI_06835 PFICI_06259 PFICI_06259 PFICI_06389 PFICI_06389 PFICI_07130 PFICI_07130 PFICI_07152 PFICI_07152 PFICI_07212 PFICI_07212 PFICI_04211 PFICI_04211 PFICI_06618 PFICI_06618 PFICI_04366 PFICI_04366 PFICI_04381 PFICI_04381 PFICI_06889 PFICI_06889 PFICI_04504 PFICI_04504 PFICI_04670 PFICI_04670 PFICI_06963 PFICI_06963 PFICI_04844 PFICI_04844 PFICI_04796 PFICI_04796 PFICI_04836 PFICI_04836 PFICI_07133 PFICI_07133 PFICI_05055 PFICI_05055 PFICI_04503 PFICI_04503 PFICI_05174 PFICI_05174 PFICI_05250 PFICI_05250 PFICI_05314 PFICI_05314 PFICI_05320 PFICI_05320 PFICI_05361 PFICI_05361 PFICI_04502 PFICI_04502 PFICI_04853 PFICI_04853 PFICI_05556 PFICI_05556 PFICI_05614 PFICI_05614 PFICI_05665 PFICI_05665 PFICI_05705 PFICI_05705 PFICI_05891 PFICI_05891 PFICI_05258 PFICI_05258 PFICI_02183 PFICI_02183 PFICI_02198 PFICI_02198 PFICI_05518 PFICI_05518 PFICI_02284 PFICI_02284 PFICI_05357 PFICI_05357 PFICI_02728 PFICI_02728 PFICI_05908 PFICI_05908 PFICI_02733 PFICI_02733 PFICI_02870 PFICI_02870 PFICI_05917 PFICI_05917 PFICI_02990 PFICI_02990 PFICI_03029 PFICI_03029 PFICI_02266 PFICI_02266 PFICI_02617 PFICI_02617 PFICI_03515 PFICI_03515 PFICI_03067 PFICI_03067 PFICI_03744 PFICI_03744 PFICI_03830 PFICI_03830 PFICI_03472 PFICI_03472 PFICI_03507 PFICI_03507 PFICI_03546 PFICI_03546 PFICI_00253 PFICI_00253 PFICI_00422 PFICI_00422 PFICI_00428 PFICI_00428 PFICI_04171 PFICI_04171 PFICI_00693 PFICI_00693 PFICI_00823 PFICI_00823 ERB1 ERB1 PFICI_00903 PFICI_00903 PFICI_01091 PFICI_01091 PFICI_01028 PFICI_01028 PFICI_00585 PFICI_00585 PFICI_01162 PFICI_01162 PFICI_01177 PFICI_01177 PFICI_00830 PFICI_00830 PFICI_01312 PFICI_01312 PFICI_01317 PFICI_01317 PFICI_00985 PFICI_00985 PFICI_01005 PFICI_01005 PFICI_01891 PFICI_01891 PFICI_01927 PFICI_01927 PFICI_01465 PFICI_01465 PFICI_01475 PFICI_01475 PFICI_01229 PFICI_01229 PFICI_02013 PFICI_02013 PFICI_01744 PFICI_01744 PFICI_01774 PFICI_01774 PFICI_01899 PFICI_01899
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PFICI_15367Brix domain-containing protein. (460 aa)
PFICI_15401Uncharacterized protein. (760 aa)
PFICI_15366ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (526 aa)
PFICI_15089WD repeat-containing protein JIP5. (437 aa)
PFICI_15025RRM domain-containing protein. (370 aa)
PFICI_14406Uncharacterized protein. (147 aa)
PFICI_15304WD_REPEATS_REGION domain-containing protein. (539 aa)
PFICI_13773Uncharacterized protein. (500 aa)
PFICI_13267Uncharacterized protein. (855 aa)
PFICI_13427Uncharacterized protein. (1281 aa)
PFICI_13442ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (587 aa)
PFICI_13639Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (593 aa)
PFICI_13684WD_REPEATS_REGION domain-containing protein. (900 aa)
PFICI_13652Helicase ATP-binding domain-containing protein. (210 aa)
PFICI_12259Nucleolar protein 56. (506 aa)
PFICI_12467Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (250 aa)
PFICI_13266TEA domain-containing protein. (1101 aa)
PFICI_12702Uncharacterized protein. (639 aa)
PFICI_12754WD_REPEATS_REGION domain-containing protein. (497 aa)
PFICI_12794ATP-dependent RNA helicase DBP7; Belongs to the DEAD box helicase family. (789 aa)
PFICI_12839Pre-rRNA-processing protein ESF2. (315 aa)
PFICI_1285460S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (517 aa)
PFICI_13651Helicase C-terminal domain-containing protein. (438 aa)
PFICI_12914Uncharacterized protein. (382 aa)
PFICI_12943Fcf2 domain-containing protein. (209 aa)
PFICI_13590Uncharacterized protein. (694 aa)
PFICI_12461Urb2 domain-containing protein. (1339 aa)
PFICI_11635Helicase C-terminal domain-containing protein. (481 aa)
PFICI_1170260S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
PFICI_12596Uncharacterized protein. (1798 aa)
PFICI_11902DUF2431 domain-containing protein. (294 aa)
PFICI_12435PDCD2_C domain-containing protein. (413 aa)
PFICI_12510ATP-dependent RNA helicase DRS1; Belongs to the DEAD box helicase family. (776 aa)
PFICI_12650Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5004 aa)
PFICI_12091Uncharacterized protein. (591 aa)
PFICI_12900Uncharacterized protein. (1049 aa)
PFICI_1086960S ribosomal subunit assembly/export protein LOC1. (200 aa)
PFICI_10927Uncharacterized protein. (1537 aa)
PFICI_10929Uncharacterized protein. (336 aa)
PFICI_11538Uncharacterized protein. (481 aa)
PFICI_11057Uncharacterized protein. (1177 aa)
PFICI_11114CP-type G domain-containing protein. (656 aa)
PFICI_11113Uncharacterized protein. (435 aa)
PFICI_11678Uncharacterized protein. (557 aa)
PFICI_11703Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (681 aa)
PFICI_11244Uncharacterized protein. (824 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
PFICI_09821WD_REPEATS_REGION domain-containing protein. (651 aa)
PFICI_09915Casein kinase I; Belongs to the protein kinase superfamily. (371 aa)
PFICI_09956Uncharacterized protein. (575 aa)
PFICI_10915WD_REPEATS_REGION domain-containing protein. (906 aa)
PFICI_1120620S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (491 aa)
PFICI_10156SRP40_C domain-containing protein. (473 aa)
PFICI_10260Uncharacterized protein. (901 aa)
PFICI_10265Uncharacterized protein. (210 aa)
PFICI_09729Importin N-terminal domain-containing protein. (1060 aa)
PFICI_08598Uncharacterized protein. (761 aa)
PFICI_08647Utp12 domain-containing protein. (387 aa)
PFICI_08821Uncharacterized protein. (1102 aa)
PFICI_08767Uncharacterized protein. (1028 aa)
PFICI_08903Bms1-type G domain-containing protein. (814 aa)
PFICI_10394ATP-dependent RNA helicase MAK5; Belongs to the DEAD box helicase family. (738 aa)
PFICI_08902WD_REPEATS_REGION domain-containing protein. (554 aa)
PFICI_09111Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (735 aa)
PFICI_09166Nucleolar protein 58. (612 aa)
PFICI_09243RNA helicase. (637 aa)
PFICI_09453Sec2p domain-containing protein. (287 aa)
PFICI_09397NUC173 domain-containing protein. (1273 aa)
PFICI_09452S1 domain-containing protein. (207 aa)
PFICI_08604RNase_PH domain-containing protein. (403 aa)
PFICI_07347Ribosome biogenesis protein RLP24. (205 aa)
PFICI_08990Ribosome biogenesis protein BRX1. (311 aa)
PFICI_09050Methyltransf_25 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (560 aa)
PFICI_07527Peptidase_M24 domain-containing protein. (413 aa)
PFICI_08954WD_REPEATS_REGION domain-containing protein. (445 aa)
PFICI_08989Uncharacterized protein. (373 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (483 aa)
PFICI_09460RNB domain-containing protein. (1356 aa)
PFICI_07912Uncharacterized protein. (218 aa)
PFICI_09289RNA helicase. (596 aa)
PFICI_07908rRNA-processing protein FCF1. (198 aa)
PFICI_09374SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (746 aa)
PFICI_07994Exosome complex component rrp45. (293 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (846 aa)
PFICI_07430Uncharacterized protein. (400 aa)
PFICI_08258Uncharacterized protein. (253 aa)
PFICI_07455AAA domain-containing protein. (629 aa)
PFICI_08328Uncharacterized protein. (1219 aa)
PFICI_06012U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (714 aa)
PFICI_07705ANK_REP_REGION domain-containing protein. (204 aa)
PFICI_07926Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (546 aa)
PFICI_07760Uncharacterized protein. (237 aa)
PFICI_08046rRNA 2'-O-methyltransferase fibrillarin. (319 aa)
PFICI_08056Periodic tryptophan protein 2. (904 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (682 aa)
PFICI_06196Uncharacterized protein. (970 aa)
PFICI_08281Helicase ATP-binding domain-containing protein. (228 aa)
PFICI_06421Uncharacterized protein. (424 aa)
PFICI_06517Uncharacterized protein. (364 aa)
PFICI_06640U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (736 aa)
PFICI_06622U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
PFICI_05994Uncharacterized protein. (370 aa)
PFICI_08335Protein MAK16; Belongs to the MAK16 family. (325 aa)
PFICI_06835Sialidase domain-containing protein. (387 aa)
PFICI_06259U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (276 aa)
PFICI_06389ECR1_N domain-containing protein. (329 aa)
PFICI_07130Uncharacterized protein. (310 aa)
PFICI_07152Uncharacterized protein. (787 aa)
PFICI_07212WD_REPEATS_REGION domain-containing protein. (538 aa)
PFICI_04211Uncharacterized protein. (373 aa)
PFICI_06618Uncharacterized protein; Belongs to the DEAD box helicase family. (582 aa)
PFICI_04366Bms1-type G domain-containing protein. (1139 aa)
PFICI_04381Uncharacterized protein. (385 aa)
PFICI_06889U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
PFICI_04504Uncharacterized protein. (366 aa)
PFICI_04670Uncharacterized protein; Belongs to the DEAD box helicase family. (670 aa)
PFICI_06963Uncharacterized protein. (322 aa)
PFICI_04844Uncharacterized protein. (662 aa)
PFICI_04796RNA helicase. (792 aa)
PFICI_04836NUC153 domain-containing protein. (671 aa)
PFICI_07133Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
PFICI_05055Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family. (285 aa)
PFICI_04503Uncharacterized protein. (487 aa)
PFICI_05174TPR_REGION domain-containing protein. (445 aa)
PFICI_05250ATP-dependent RNA helicase dbp9. (596 aa)
PFICI_05314TPR_REGION domain-containing protein. (1043 aa)
PFICI_05320ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (546 aa)
PFICI_05361Uncharacterized protein. (1429 aa)
PFICI_04502KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
PFICI_04853ATP-dependent RNA helicase DBP10. (903 aa)
PFICI_05556ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (553 aa)
PFICI_05614Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)
PFICI_05665Uncharacterized protein. (1044 aa)
PFICI_05705RNase_PH domain-containing protein. (286 aa)
PFICI_05891Sas10 domain-containing protein. (618 aa)
PFICI_05258Uncharacterized protein. (351 aa)
PFICI_02183Uncharacterized protein. (303 aa)
PFICI_02198Pectate lyase F. (237 aa)
PFICI_05518Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
PFICI_02284RRM domain-containing protein. (310 aa)
PFICI_05357Uncharacterized protein. (179 aa)
PFICI_02728Uncharacterized protein. (400 aa)
PFICI_05908Rsa3 domain-containing protein. (105 aa)
PFICI_02733U3 small nucleolar RNA-associated protein 10. (1803 aa)
PFICI_02870RTC domain-containing protein. (420 aa)
PFICI_05917Zinc finger protein bud20. (119 aa)
PFICI_02990RNase_PH domain-containing protein. (342 aa)
PFICI_03029Uncharacterized protein. (247 aa)
PFICI_02266Uncharacterized protein. (218 aa)
PFICI_02617RNase_PH domain-containing protein. (273 aa)
PFICI_03515Ribosomal RNA small subunit methyltransferase NEP1. (253 aa)
PFICI_03067Pectate lyase F. (262 aa)
PFICI_03744Brix domain-containing protein. (417 aa)
PFICI_03830AAA domain-containing protein. (1019 aa)
PFICI_03472Uncharacterized protein. (529 aa)
PFICI_03507MI domain-containing protein. (879 aa)
PFICI_03546U3 small nucleolar RNA-associated protein 22. (1065 aa)
PFICI_00253rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family. (119 aa)
PFICI_00422Uncharacterized protein. (901 aa)
PFICI_00428Uncharacterized protein. (405 aa)
PFICI_04171Uncharacterized protein. (329 aa)
PFICI_00693Uncharacterized protein. (256 aa)
PFICI_00823Brix domain-containing protein. (316 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (762 aa)
PFICI_00903G-patch domain-containing protein. (363 aa)
PFICI_01091Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (176 aa)
PFICI_01028WD_REPEATS_REGION domain-containing protein. (517 aa)
PFICI_00585PUM-HD domain-containing protein. (712 aa)
PFICI_01162Ribosome biogenesis protein nsa2. (260 aa)
PFICI_01177RRM domain-containing protein. (576 aa)
PFICI_00830WD_REPEATS_REGION domain-containing protein. (598 aa)
PFICI_01312Exosome complex exonuclease dis3; Belongs to the RNR ribonuclease family. (984 aa)
PFICI_01317CBF domain-containing protein. (546 aa)
PFICI_00985Pre-rRNA-processing protein PNO1. (262 aa)
PFICI_01005Methyltransferase BUD23. (280 aa)
PFICI_01891Uncharacterized protein. (474 aa)
PFICI_01927CBF domain-containing protein. (1029 aa)
PFICI_01465zf-LYAR domain-containing protein. (396 aa)
PFICI_01475CP-type G domain-containing protein. (544 aa)
PFICI_01229DRIM domain-containing protein. (2664 aa)
PFICI_02013WD_REPEATS_REGION domain-containing protein. (962 aa)
PFICI_01744Uncharacterized protein. (994 aa)
PFICI_01774Uncharacterized protein. (776 aa)
PFICI_01899RNase_PH domain-containing protein. (252 aa)
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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