39 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_13684	WD_REPEATS_REGION domain-containing protein. (900 aa)
	PFICI_12259	Nucleolar protein 56. (506 aa)
	PFICI_12596	Uncharacterized protein. (1798 aa)
	PFICI_12091	Uncharacterized protein. (591 aa)
	PFICI_09821	WD_REPEATS_REGION domain-containing protein. (651 aa)
	PFICI_09956	Uncharacterized protein. (575 aa)
	PFICI_10915	WD_REPEATS_REGION domain-containing protein. (906 aa)
	PFICI_10260	Uncharacterized protein. (901 aa)
	PFICI_08647	Utp12 domain-containing protein. (387 aa)
	PFICI_08902	WD_REPEATS_REGION domain-containing protein. (554 aa)
	PFICI_09166	Nucleolar protein 58. (612 aa)
	PFICI_08954	WD_REPEATS_REGION domain-containing protein. (445 aa)
	PFICI_07908	rRNA-processing protein FCF1. (198 aa)
	PFICI_08046	rRNA 2'-O-methyltransferase fibrillarin. (319 aa)
	PFICI_08056	Periodic tryptophan protein 2. (904 aa)
	PFICI_06196	Uncharacterized protein. (970 aa)
	PFICI_06640	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (736 aa)
	PFICI_06622	U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
	PFICI_06259	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (276 aa)
	PFICI_07130	Uncharacterized protein. (310 aa)
	PFICI_07212	WD_REPEATS_REGION domain-containing protein. (538 aa)
	PFICI_04211	Uncharacterized protein. (373 aa)
	PFICI_04366	Bms1-type G domain-containing protein. (1139 aa)
	PFICI_06889	U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
	PFICI_07133	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
	PFICI_04503	Uncharacterized protein. (487 aa)
	PFICI_04502	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
	PFICI_05665	Uncharacterized protein. (1044 aa)
	PFICI_05891	Sas10 domain-containing protein. (618 aa)
	PFICI_02728	Uncharacterized protein. (400 aa)
	PFICI_02733	U3 small nucleolar RNA-associated protein 10. (1803 aa)
	PFICI_03515	Ribosomal RNA small subunit methyltransferase NEP1. (253 aa)
	PFICI_03546	U3 small nucleolar RNA-associated protein 22. (1065 aa)
	PFICI_00422	Uncharacterized protein. (901 aa)
	PFICI_00428	Uncharacterized protein. (405 aa)
	PFICI_00830	WD_REPEATS_REGION domain-containing protein. (598 aa)
	PFICI_01317	CBF domain-containing protein. (546 aa)
	PFICI_01229	DRIM domain-containing protein. (2664 aa)
	PFICI_02013	WD_REPEATS_REGION domain-containing protein. (962 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00422	PFICI_00428	W3XKQ6	W3XKS8	Uncharacterized protein.	Uncharacterized protein.	0.996
PFICI_00422	PFICI_00830	W3XKQ6	W3XNA3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
PFICI_00422	PFICI_01229	W3XKQ6	W3XQ72	Uncharacterized protein.	DRIM domain-containing protein.	0.999
PFICI_00422	PFICI_01317	W3XKQ6	W3XNC2	Uncharacterized protein.	CBF domain-containing protein.	0.999
PFICI_00422	PFICI_02013	W3XKQ6	W3XQD7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.985
PFICI_00422	PFICI_02728	W3XKQ6	W3XF29	Uncharacterized protein.	Uncharacterized protein.	0.996
PFICI_00422	PFICI_02733	W3XKQ6	W3XF34	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 10.	0.985
PFICI_00422	PFICI_03515	W3XKQ6	W3XHH8	Uncharacterized protein.	Ribosomal RNA small subunit methyltransferase NEP1.	0.999
PFICI_00422	PFICI_03546	W3XKQ6	W3XJT6	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 22.	0.999
PFICI_00422	PFICI_04211	W3XKQ6	W3X8H3	Uncharacterized protein.	Uncharacterized protein.	0.985
PFICI_00422	PFICI_04366	W3XKQ6	W3X8X1	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
PFICI_00422	PFICI_04502	W3XKQ6	W3XBS1	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
PFICI_00422	PFICI_04503	W3XKQ6	W3XB02	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_00422	PFICI_05665	W3XKQ6	W3XCR2	Uncharacterized protein.	Uncharacterized protein.	0.992
PFICI_00422	PFICI_05891	W3XKQ6	W3XD85	Uncharacterized protein.	Sas10 domain-containing protein.	0.999
PFICI_00422	PFICI_06196	W3XKQ6	W3X5A1	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_00422	PFICI_06259	W3XKQ6	W3X7A7	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.998
PFICI_00422	PFICI_06622	W3XKQ6	W3X6E7	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein IMP3.	0.959
PFICI_00422	PFICI_06640	W3XKQ6	W3X694	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.998
PFICI_00422	PFICI_06889	W3XKQ6	W3X915	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein IMP4.	0.975