6 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_08907	Uncharacterized protein. (191 aa)
	PFICI_09354	GYF domain-containing protein. (438 aa)
	PFICI_05316	Uncharacterized protein. (524 aa)
	PFICI_03713	Uncharacterized protein. (422 aa)
	PFICI_03511	Uncharacterized protein. (633 aa)
	PFICI_01161	C3H1-type domain-containing protein. (644 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_01161	PFICI_08907	W3XMR1	W3WZ45	C3H1-type domain-containing protein.	Uncharacterized protein.	0.867
PFICI_03511	PFICI_03713	W3XJQ2	W3XHZ2	Uncharacterized protein.	Uncharacterized protein.	0.412
PFICI_03511	PFICI_05316	W3XJQ2	W3XBM3	Uncharacterized protein.	Uncharacterized protein.	0.879
PFICI_03511	PFICI_08907	W3XJQ2	W3WZ45	Uncharacterized protein.	Uncharacterized protein.	0.490
PFICI_03713	PFICI_03511	W3XHZ2	W3XJQ2	Uncharacterized protein.	Uncharacterized protein.	0.412
PFICI_03713	PFICI_05316	W3XHZ2	W3XBM3	Uncharacterized protein.	Uncharacterized protein.	0.449
PFICI_03713	PFICI_09354	W3XHZ2	W3X2X4	Uncharacterized protein.	GYF domain-containing protein.	0.645
PFICI_05316	PFICI_03511	W3XBM3	W3XJQ2	Uncharacterized protein.	Uncharacterized protein.	0.879
PFICI_05316	PFICI_03713	W3XBM3	W3XHZ2	Uncharacterized protein.	Uncharacterized protein.	0.449
PFICI_05316	PFICI_08907	W3XBM3	W3WZ45	Uncharacterized protein.	Uncharacterized protein.	0.626
PFICI_05316	PFICI_09354	W3XBM3	W3X2X4	Uncharacterized protein.	GYF domain-containing protein.	0.826
PFICI_08907	PFICI_01161	W3WZ45	W3XMR1	Uncharacterized protein.	C3H1-type domain-containing protein.	0.867
PFICI_08907	PFICI_03511	W3WZ45	W3XJQ2	Uncharacterized protein.	Uncharacterized protein.	0.490
PFICI_08907	PFICI_05316	W3WZ45	W3XBM3	Uncharacterized protein.	Uncharacterized protein.	0.626
PFICI_09354	PFICI_03713	W3X2X4	W3XHZ2	GYF domain-containing protein.	Uncharacterized protein.	0.645
PFICI_09354	PFICI_05316	W3X2X4	W3XBM3	GYF domain-containing protein.	Uncharacterized protein.	0.826