44 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_13267	Uncharacterized protein. (855 aa)
	PFICI_13083	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (411 aa)
	PFICI_13684	WD_REPEATS_REGION domain-containing protein. (900 aa)
	PFICI_12943	Fcf2 domain-containing protein. (209 aa)
	PFICI_12596	Uncharacterized protein. (1798 aa)
	PFICI_12097	Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (181 aa)
	PFICI_12091	Uncharacterized protein. (591 aa)
	PFICI_09821	WD_REPEATS_REGION domain-containing protein. (651 aa)
	PFICI_09956	Uncharacterized protein. (575 aa)
	PFICI_10915	WD_REPEATS_REGION domain-containing protein. (906 aa)
	PFICI_10260	Uncharacterized protein. (901 aa)
	PFICI_10265	Uncharacterized protein. (210 aa)
	PFICI_08647	Utp12 domain-containing protein. (387 aa)
	PFICI_08732	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
	PFICI_08903	Bms1-type G domain-containing protein. (814 aa)
	PFICI_08902	WD_REPEATS_REGION domain-containing protein. (554 aa)
	PFICI_09166	Nucleolar protein 58. (612 aa)
	PFICI_08954	WD_REPEATS_REGION domain-containing protein. (445 aa)
	PFICI_07908	rRNA-processing protein FCF1. (198 aa)
	PFICI_08328	Uncharacterized protein. (1219 aa)
	PFICI_08056	Periodic tryptophan protein 2. (904 aa)
	PFICI_08000	Kri1_C domain-containing protein. (633 aa)
	PFICI_07212	WD_REPEATS_REGION domain-containing protein. (538 aa)
	PFICI_04211	Uncharacterized protein. (373 aa)
	PFICI_04366	Bms1-type G domain-containing protein. (1139 aa)
	PFICI_07133	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
	PFICI_04503	Uncharacterized protein. (487 aa)
	PFICI_04502	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
	PFICI_05866	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	PFICI_05891	Sas10 domain-containing protein. (618 aa)
	PFICI_05258	Uncharacterized protein. (351 aa)
	PFICI_05318	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	PFICI_05287	Uncharacterized protein. (918 aa)
	PFICI_02513	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	PFICI_02728	Uncharacterized protein. (400 aa)
	PFICI_00428	Uncharacterized protein. (405 aa)
	PFICI_00673	Uncharacterized protein. (360 aa)
	PFICI_00773	Uncharacterized protein. (259 aa)
	PFICI_01091	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (176 aa)
	PFICI_01317	CBF domain-containing protein. (546 aa)
	PFICI_01005	Methyltransferase BUD23. (280 aa)
	PFICI_02012	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	PFICI_02013	WD_REPEATS_REGION domain-containing protein. (962 aa)
	PFICI_01774	Uncharacterized protein. (776 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00428	PFICI_00773	W3XKS8	W3XLU1	Uncharacterized protein.	Uncharacterized protein.	0.810
PFICI_00428	PFICI_01005	W3XKS8	W3XNU2	Uncharacterized protein.	Methyltransferase BUD23.	0.678
PFICI_00428	PFICI_01091	W3XKS8	W3XMK1	Uncharacterized protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.610
PFICI_00428	PFICI_01317	W3XKS8	W3XNC2	Uncharacterized protein.	CBF domain-containing protein.	0.994
PFICI_00428	PFICI_01774	W3XKS8	W3XRS8	Uncharacterized protein.	Uncharacterized protein.	0.566
PFICI_00428	PFICI_02012	W3XKS8	W3XQB4	Uncharacterized protein.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.964
PFICI_00428	PFICI_02013	W3XKS8	W3XQD7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.992
PFICI_00428	PFICI_02728	W3XKS8	W3XF29	Uncharacterized protein.	Uncharacterized protein.	0.994
PFICI_00428	PFICI_04211	W3XKS8	W3X8H3	Uncharacterized protein.	Uncharacterized protein.	0.992
PFICI_00428	PFICI_04366	W3XKS8	W3X8X1	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
PFICI_00428	PFICI_04502	W3XKS8	W3XBS1	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.988
PFICI_00428	PFICI_04503	W3XKS8	W3XB02	Uncharacterized protein.	Uncharacterized protein.	0.998
PFICI_00428	PFICI_05258	W3XKS8	W3XD92	Uncharacterized protein.	Uncharacterized protein.	0.903
PFICI_00428	PFICI_05287	W3XKS8	W3XDY1	Uncharacterized protein.	Uncharacterized protein.	0.480
PFICI_00428	PFICI_05318	W3XKS8	W3XDE9	Uncharacterized protein.	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.954
PFICI_00428	PFICI_05866	W3XKS8	W3XD57	Uncharacterized protein.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.967
PFICI_00428	PFICI_05891	W3XKS8	W3XD85	Uncharacterized protein.	Sas10 domain-containing protein.	0.985
PFICI_00428	PFICI_07133	W3XKS8	W3XAD7	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.960
PFICI_00428	PFICI_07212	W3XKS8	W3X834	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.992
PFICI_00428	PFICI_07908	W3XKS8	W3X2Z5	Uncharacterized protein.	rRNA-processing protein FCF1.	0.992