22 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_01486	Uncharacterized protein. (618 aa)
	PFICI_01672	Uncharacterized protein. (1550 aa)
	PFICI_07058	t-SNARE coiled-coil homology domain-containing protein. (320 aa)
	PFICI_06458	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (295 aa)
	PFICI_07272	Uncharacterized protein. (679 aa)
	PFICI_08295	Uncharacterized protein. (809 aa)
	PFICI_08052	CASP_C domain-containing protein. (737 aa)
	PFICI_09398	t-SNARE coiled-coil homology domain-containing protein. (200 aa)
	PFICI_09233	Uncharacterized protein. (819 aa)
	PFICI_10165	Arf-GAP domain-containing protein. (570 aa)
	PFICI_11027	Uncharacterized protein. (1443 aa)
	PFICI_12489	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1218 aa)
	PFICI_14757	Uncharacterized protein. (451 aa)
	PFICI_05856	Uncharacterized protein. (765 aa)
	PFICI_04987	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (854 aa)
	PFICI_02134	Trafficking protein particle complex subunit BET3. (192 aa)
	PFICI_05517	Ras-related protein Rab-6A. (173 aa)
	PFICI_02884	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (876 aa)
	PFICI_03528	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (708 aa)
	PFICI_00627	Uncharacterized protein. (444 aa)
	PFICI_01121	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (194 aa)
	PFICI_01123	Cog4 domain-containing protein. (807 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00627	PFICI_01123	W3XLC3	W3XMY6	Uncharacterized protein.	Cog4 domain-containing protein.	0.998
PFICI_00627	PFICI_01672	W3XLC3	W3XPE5	Uncharacterized protein.	Uncharacterized protein.	0.412
PFICI_00627	PFICI_03528	W3XLC3	W3XHE2	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.999
PFICI_00627	PFICI_05517	W3XLC3	W3XEM1	Uncharacterized protein.	Ras-related protein Rab-6A.	0.844
PFICI_00627	PFICI_05856	W3XLC3	W3XD47	Uncharacterized protein.	Uncharacterized protein.	0.998
PFICI_00627	PFICI_07058	W3XLC3	W3XA55	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.873
PFICI_00627	PFICI_08295	W3XLC3	W3X6H7	Uncharacterized protein.	Uncharacterized protein.	0.998
PFICI_00627	PFICI_09233	W3XLC3	W3WZV7	Uncharacterized protein.	Uncharacterized protein.	0.630
PFICI_00627	PFICI_09398	W3XLC3	W3X0B6	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.848
PFICI_00627	PFICI_14757	W3XLC3	W3WLY7	Uncharacterized protein.	Uncharacterized protein.	0.917
PFICI_01121	PFICI_02884	W3XMM7	W3XFS4	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.999
PFICI_01121	PFICI_04987	W3XMM7	W3XD51	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.988
PFICI_01121	PFICI_06458	W3XMM7	W3X8E1	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.	0.985
PFICI_01121	PFICI_07058	W3XMM7	W3XA55	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	t-SNARE coiled-coil homology domain-containing protein.	0.542
PFICI_01121	PFICI_09233	W3XMM7	W3WZV7	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Uncharacterized protein.	0.636
PFICI_01121	PFICI_12489	W3XMM7	W3WNP9	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.	0.992
PFICI_01123	PFICI_00627	W3XMY6	W3XLC3	Cog4 domain-containing protein.	Uncharacterized protein.	0.998
PFICI_01123	PFICI_02884	W3XMY6	W3XFS4	Cog4 domain-containing protein.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.527
PFICI_01123	PFICI_03528	W3XMY6	W3XHE2	Cog4 domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.998
PFICI_01123	PFICI_05517	W3XMY6	W3XEM1	Cog4 domain-containing protein.	Ras-related protein Rab-6A.	0.723