21 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_06196	Uncharacterized protein. (970 aa)
	PFICI_02013	WD_REPEATS_REGION domain-containing protein. (962 aa)
	PFICI_00422	Uncharacterized protein. (901 aa)
	PFICI_02733	U3 small nucleolar RNA-associated protein 10. (1803 aa)
	PFICI_02728	Uncharacterized protein. (400 aa)
	PFICI_05287	Uncharacterized protein. (918 aa)
	PFICI_04503	Uncharacterized protein. (487 aa)
	PFICI_07133	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
	PFICI_06889	U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
	PFICI_04366	Bms1-type G domain-containing protein. (1139 aa)
	PFICI_07262	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (241 aa)
	PFICI_07212	WD_REPEATS_REGION domain-containing protein. (538 aa)
	PFICI_06622	U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
	PFICI_06012	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (714 aa)
	PFICI_09166	Nucleolar protein 58. (612 aa)
	PFICI_08903	Bms1-type G domain-containing protein. (814 aa)
	PFICI_10915	WD_REPEATS_REGION domain-containing protein. (906 aa)
	PFICI_11207	H/ACA ribonucleoprotein complex subunit 3. (68 aa)
	PFICI_12091	Uncharacterized protein. (591 aa)
	PFICI_12596	Uncharacterized protein. (1798 aa)
	PFICI_12259	Nucleolar protein 56. (506 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00422	PFICI_02013	W3XKQ6	W3XQD7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.985
PFICI_00422	PFICI_02728	W3XKQ6	W3XF29	Uncharacterized protein.	Uncharacterized protein.	0.996
PFICI_00422	PFICI_02733	W3XKQ6	W3XF34	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 10.	0.985
PFICI_00422	PFICI_04366	W3XKQ6	W3X8X1	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
PFICI_00422	PFICI_04503	W3XKQ6	W3XB02	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_00422	PFICI_05287	W3XKQ6	W3XDY1	Uncharacterized protein.	Uncharacterized protein.	0.518
PFICI_00422	PFICI_06012	W3XKQ6	W3X4M1	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.994
PFICI_00422	PFICI_06196	W3XKQ6	W3X5A1	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_00422	PFICI_06622	W3XKQ6	W3X6E7	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein IMP3.	0.959
PFICI_00422	PFICI_06889	W3XKQ6	W3X915	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein IMP4.	0.975
PFICI_00422	PFICI_07133	W3XKQ6	W3XAD7	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.906
PFICI_00422	PFICI_07212	W3XKQ6	W3X834	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.975
PFICI_00422	PFICI_07262	W3XKQ6	W3X8A3	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.593
PFICI_00422	PFICI_08903	W3XKQ6	W3WYW6	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.936
PFICI_00422	PFICI_09166	W3XKQ6	W3WZL1	Uncharacterized protein.	Nucleolar protein 58.	0.998
PFICI_00422	PFICI_10915	W3XKQ6	W3WW09	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.995
PFICI_00422	PFICI_12091	W3XKQ6	W3WSA6	Uncharacterized protein.	Uncharacterized protein.	0.997
PFICI_00422	PFICI_12259	W3XKQ6	W3WN29	Uncharacterized protein.	Nucleolar protein 56.	0.979
PFICI_00422	PFICI_12596	W3XKQ6	W3WR77	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_02013	PFICI_00422	W3XQD7	W3XKQ6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.985