(27 nodes) Late endosome to vacuole transport network (Pestalotiopsis fici)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_00216	Uncharacterized protein. (904 aa)
	PFICI_02615	Uncharacterized protein. (425 aa)
	PFICI_03966	Uncharacterized protein. (651 aa)
	PFICI_12789	Uncharacterized protein. (472 aa)
	PFICI_13432	Uncharacterized protein. (208 aa)
	PFICI_13128	E3 ubiquitin-protein ligase. (819 aa)
	PFICI_14432	Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family. (435 aa)
	PFICI_14356	Uncharacterized protein. (160 aa)
	PFICI_14553	Uncharacterized protein. (247 aa)
	PFICI_14430	MPN domain-containing protein. (564 aa)
	PFICI_10338	Uncharacterized protein. (195 aa)
	PFICI_08838	Uncharacterized protein. (212 aa)
	PFICI_08597	Uncharacterized protein. (204 aa)
	PFICI_11033	Uncharacterized protein. (129 aa)
	PFICI_12450	DOA4-independent degradation protein 4. (231 aa)
	PFICI_12959	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (827 aa)
	PFICI_08945	Uncharacterized protein. (229 aa)
	PFICI_07811	Protein ssh-4. (485 aa)
	PFICI_07725	Vacuolar protein sorting-associated protein 68. (171 aa)
	PFICI_08466	Vacuolar protein sorting-associated protein; May be involved in recycling of membrane proteins between an endocytic compartment and the TGN; Belongs to the VPS13 family. (3201 aa)
	PFICI_07151	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (237 aa)
	PFICI_06458	Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (295 aa)
	PFICI_07128	Vacuolar-sorting protein SNF7. (223 aa)
	PFICI_04243	Uncharacterized protein. (300 aa)
	PFICI_05319	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (261 aa)
	PFICI_05469	Uncharacterized protein. (1569 aa)
	PFICI_04987	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (854 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00216	PFICI_07811	W3XK21	W3X4I3	Uncharacterized protein.	Protein ssh-4.	0.565
PFICI_02615	PFICI_04243	W3XEW4	W3XAD5	Uncharacterized protein.	Uncharacterized protein.	0.972
PFICI_02615	PFICI_05319	W3XEW4	W3XBI0	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.654
PFICI_02615	PFICI_07128	W3XEW4	W3XAD0	Uncharacterized protein.	Vacuolar-sorting protein SNF7.	0.919
PFICI_02615	PFICI_07151	W3XEW4	W3X7Y7	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.666
PFICI_02615	PFICI_08597	W3XEW4	W3WYA3	Uncharacterized protein.	Uncharacterized protein.	0.855
PFICI_02615	PFICI_08838	W3XEW4	W3WYQ0	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_02615	PFICI_08945	W3XEW4	W3X116	Uncharacterized protein.	Uncharacterized protein.	0.867
PFICI_02615	PFICI_10338	W3XEW4	W3WZH1	Uncharacterized protein.	Uncharacterized protein.	0.611
PFICI_02615	PFICI_12450	W3XEW4	W3WRQ9	Uncharacterized protein.	DOA4-independent degradation protein 4.	0.914
PFICI_02615	PFICI_12789	W3XEW4	W3WPL7	Uncharacterized protein.	Uncharacterized protein.	0.825
PFICI_02615	PFICI_13432	W3XEW4	W3WM48	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_02615	PFICI_14432	W3XEW4	W3WKZ3	Uncharacterized protein.	Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.	0.999
PFICI_03966	PFICI_13128	W3XL13	W3WLJ4	Uncharacterized protein.	E3 ubiquitin-protein ligase.	0.439
PFICI_04243	PFICI_02615	W3XAD5	W3XEW4	Uncharacterized protein.	Uncharacterized protein.	0.972
PFICI_04243	PFICI_07128	W3XAD5	W3XAD0	Uncharacterized protein.	Vacuolar-sorting protein SNF7.	0.955
PFICI_04243	PFICI_07151	W3XAD5	W3X7Y7	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.654
PFICI_04243	PFICI_08597	W3XAD5	W3WYA3	Uncharacterized protein.	Uncharacterized protein.	0.889
PFICI_04243	PFICI_08838	W3XAD5	W3WYQ0	Uncharacterized protein.	Uncharacterized protein.	0.944
PFICI_04243	PFICI_08945	W3XAD5	W3X116	Uncharacterized protein.	Uncharacterized protein.	0.923