(8 nodes) CCR4-NOT complex network (Pestalotiopsis fici)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_08088	ABC transporter ATP-binding protein C20G4.01. (284 aa)
	PFICI_08370	Glucose-repressible alcohol dehydrogenase transcriptional effector. (715 aa)
	PFICI_10278	Uncharacterized protein. (803 aa)
	PFICI_10279	Uncharacterized protein. (784 aa)
	PFICI_10356	Uncharacterized protein. (2188 aa)
	PFICI_11848	Uncharacterized protein. (508 aa)
	PFICI_14283	Cell differentiation protein rcd1. (361 aa)
	PFICI_13107	Uncharacterized protein. (632 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_08088	PFICI_10356	W3X3H5	W3WWY0	ABC transporter ATP-binding protein C20G4.01.	Uncharacterized protein.	0.487
PFICI_08088	PFICI_13107	W3X3H5	W3WL73	ABC transporter ATP-binding protein C20G4.01.	Uncharacterized protein.	0.609
PFICI_08088	PFICI_14283	W3X3H5	W3WMN6	ABC transporter ATP-binding protein C20G4.01.	Cell differentiation protein rcd1.	0.518
PFICI_08370	PFICI_10278	W3X6N7	W3WZB2	Glucose-repressible alcohol dehydrogenase transcriptional effector.	Uncharacterized protein.	0.936
PFICI_08370	PFICI_10279	W3X6N7	W3WYN1	Glucose-repressible alcohol dehydrogenase transcriptional effector.	Uncharacterized protein.	0.936
PFICI_08370	PFICI_10356	W3X6N7	W3WWY0	Glucose-repressible alcohol dehydrogenase transcriptional effector.	Uncharacterized protein.	0.998
PFICI_08370	PFICI_11848	W3X6N7	W3WUC3	Glucose-repressible alcohol dehydrogenase transcriptional effector.	Uncharacterized protein.	0.998
PFICI_08370	PFICI_13107	W3X6N7	W3WL73	Glucose-repressible alcohol dehydrogenase transcriptional effector.	Uncharacterized protein.	0.989
PFICI_08370	PFICI_14283	W3X6N7	W3WMN6	Glucose-repressible alcohol dehydrogenase transcriptional effector.	Cell differentiation protein rcd1.	0.995
PFICI_10278	PFICI_08370	W3WZB2	W3X6N7	Uncharacterized protein.	Glucose-repressible alcohol dehydrogenase transcriptional effector.	0.936
PFICI_10278	PFICI_10279	W3WZB2	W3WYN1	Uncharacterized protein.	Uncharacterized protein.	0.792
PFICI_10278	PFICI_10356	W3WZB2	W3WWY0	Uncharacterized protein.	Uncharacterized protein.	0.951
PFICI_10278	PFICI_11848	W3WZB2	W3WUC3	Uncharacterized protein.	Uncharacterized protein.	0.938
PFICI_10278	PFICI_13107	W3WZB2	W3WL73	Uncharacterized protein.	Uncharacterized protein.	0.926
PFICI_10278	PFICI_14283	W3WZB2	W3WMN6	Uncharacterized protein.	Cell differentiation protein rcd1.	0.950
PFICI_10279	PFICI_08370	W3WYN1	W3X6N7	Uncharacterized protein.	Glucose-repressible alcohol dehydrogenase transcriptional effector.	0.936
PFICI_10279	PFICI_10278	W3WYN1	W3WZB2	Uncharacterized protein.	Uncharacterized protein.	0.792
PFICI_10279	PFICI_10356	W3WYN1	W3WWY0	Uncharacterized protein.	Uncharacterized protein.	0.967
PFICI_10279	PFICI_11848	W3WYN1	W3WUC3	Uncharacterized protein.	Uncharacterized protein.	0.958
PFICI_10279	PFICI_13107	W3WYN1	W3WL73	Uncharacterized protein.	Uncharacterized protein.	0.950