80 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_00422	Uncharacterized protein. (901 aa)
	PFICI_05287	Uncharacterized protein. (918 aa)
	PFICI_02290	Uncharacterized protein. (258 aa)
	PFICI_00823	Brix domain-containing protein. (316 aa)
	PFICI_00515	Uncharacterized protein. (304 aa)
	PFICI_01091	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (176 aa)
	PFICI_01162	Ribosome biogenesis protein nsa2. (260 aa)
	PFICI_01177	RRM domain-containing protein. (576 aa)
	PFICI_00830	WD_REPEATS_REGION domain-containing protein. (598 aa)
	PFICI_01317	CBF domain-containing protein. (546 aa)
	PFICI_01886	F-box domain-containing protein. (1222 aa)
	PFICI_01927	CBF domain-containing protein. (1029 aa)
	PFICI_01229	DRIM domain-containing protein. (2664 aa)
	PFICI_02013	WD_REPEATS_REGION domain-containing protein. (962 aa)
	PFICI_02728	Uncharacterized protein. (400 aa)
	PFICI_05908	Rsa3 domain-containing protein. (105 aa)
	PFICI_05891	Sas10 domain-containing protein. (618 aa)
	PFICI_02183	Uncharacterized protein. (303 aa)
	PFICI_05917	Zinc finger protein bud20. (119 aa)
	PFICI_03067	Pectate lyase F. (262 aa)
	PFICI_02284	RRM domain-containing protein. (310 aa)
	PFICI_02198	Pectate lyase F. (237 aa)
	PFICI_15025	RRM domain-containing protein. (370 aa)
	PFICI_15217	Zn(2)-C6 fungal-type domain-containing protein. (931 aa)
	PFICI_13147	RING-type domain-containing protein. (655 aa)
	PFICI_13442	ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (587 aa)
	PFICI_12403	Nucleolar protein 9. (717 aa)
	PFICI_13590	Uncharacterized protein. (694 aa)
	PFICI_11702	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	PFICI_12596	Uncharacterized protein. (1798 aa)
	PFICI_12091	Uncharacterized protein. (591 aa)
	PFICI_10869	60S ribosomal subunit assembly/export protein LOC1. (200 aa)
	PFICI_10929	Uncharacterized protein. (336 aa)
	PFICI_11538	Uncharacterized protein. (481 aa)
	PFICI_11113	Uncharacterized protein. (435 aa)
	PFICI_11703	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (681 aa)
	PFICI_11244	Uncharacterized protein. (824 aa)
	PFICI_09821	WD_REPEATS_REGION domain-containing protein. (651 aa)
	PFICI_09956	Uncharacterized protein. (575 aa)
	PFICI_10260	Uncharacterized protein. (901 aa)
	PFICI_10425	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (332 aa)
	PFICI_08647	Utp12 domain-containing protein. (387 aa)
	PFICI_08903	Bms1-type G domain-containing protein. (814 aa)
	PFICI_08902	WD_REPEATS_REGION domain-containing protein. (554 aa)
	PFICI_09243	RNA helicase. (637 aa)
	PFICI_07347	Ribosome biogenesis protein RLP24. (205 aa)
	PFICI_08990	Ribosome biogenesis protein BRX1. (311 aa)
	PFICI_09060	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	PFICI_08954	WD_REPEATS_REGION domain-containing protein. (445 aa)
	PFICI_08989	Uncharacterized protein. (373 aa)
	PFICI_09289	RNA helicase. (596 aa)
	PFICI_07908	rRNA-processing protein FCF1. (198 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (846 aa)
	PFICI_08328	Uncharacterized protein. (1219 aa)
	PFICI_06012	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (714 aa)
	PFICI_07760	Uncharacterized protein. (237 aa)
	PFICI_08056	Periodic tryptophan protein 2. (904 aa)
	PFICI_06196	Uncharacterized protein. (970 aa)
	PFICI_08266	Uncharacterized protein. (280 aa)
	PFICI_06517	Uncharacterized protein. (364 aa)
	PFICI_06640	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (736 aa)
	PFICI_06622	U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
	PFICI_08335	Protein MAK16; Belongs to the MAK16 family. (325 aa)
	PFICI_06825	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	PFICI_06259	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (276 aa)
	PFICI_07130	Uncharacterized protein. (310 aa)
	PFICI_07152	Uncharacterized protein. (787 aa)
	PFICI_06889	U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
	PFICI_04796	RNA helicase. (792 aa)
	PFICI_04503	Uncharacterized protein. (487 aa)
	PFICI_05185	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (523 aa)
	PFICI_04502	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
	PFICI_04853	ATP-dependent RNA helicase DBP10. (903 aa)
	PFICI_05556	ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (553 aa)
	PFICI_05714	Uncharacterized protein. (717 aa)
	PFICI_00693	Uncharacterized protein. (256 aa)
	PFICI_04171	Uncharacterized protein. (329 aa)
	PFICI_00648	Uncharacterized protein. (206 aa)
	PFICI_00428	Uncharacterized protein. (405 aa)
	PFICI_00413	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (311 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00413	PFICI_00428	W3XKR0	W3XKS8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.521
PFICI_00413	PFICI_00693	W3XKR0	W3XLL2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.826
PFICI_00413	PFICI_00823	W3XKR0	W3XLZ4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Brix domain-containing protein.	0.911
PFICI_00413	PFICI_00830	W3XKR0	W3XNA3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	WD_REPEATS_REGION domain-containing protein.	0.435
PFICI_00413	PFICI_01091	W3XKR0	W3XMK1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.804
PFICI_00413	PFICI_01162	W3XKR0	W3XMX3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosome biogenesis protein nsa2.	0.820
PFICI_00413	PFICI_01317	W3XKR0	W3XNC2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	CBF domain-containing protein.	0.418
PFICI_00413	PFICI_01927	W3XKR0	W3XQ31	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	CBF domain-containing protein.	0.467
PFICI_00413	PFICI_02013	W3XKR0	W3XQD7	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	WD_REPEATS_REGION domain-containing protein.	0.426
PFICI_00413	PFICI_02183	W3XKR0	W3XDI1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.820
PFICI_00413	PFICI_02198	W3XKR0	W3XDJ8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Pectate lyase F.	0.433
PFICI_00413	PFICI_02728	W3XKR0	W3XF29	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.968
PFICI_00413	PFICI_03067	W3XKR0	W3XHX5	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Pectate lyase F.	0.433
PFICI_00413	PFICI_04171	W3XKR0	W3XLK8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.455
PFICI_00413	PFICI_04502	W3XKR0	W3XBS1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.972
PFICI_00413	PFICI_04503	W3XKR0	W3XB02	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.608
PFICI_00413	PFICI_05185	W3XKR0	W3XBB4	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.	0.428
PFICI_00413	PFICI_05891	W3XKR0	W3XD85	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Sas10 domain-containing protein.	0.406
PFICI_00413	PFICI_05917	W3XKR0	W3XFP9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Zinc finger protein bud20.	0.862
PFICI_00413	PFICI_06196	W3XKR0	W3X5A1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.464