26 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_09243	RNA helicase. (637 aa)
	PFICI_15025	RRM domain-containing protein. (370 aa)
	PFICI_13442	ATP-dependent RNA helicase dbp3; Belongs to the DEAD box helicase family. (587 aa)
	PFICI_11702	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	PFICI_10869	60S ribosomal subunit assembly/export protein LOC1. (200 aa)
	PFICI_11703	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (681 aa)
	PFICI_11244	Uncharacterized protein. (824 aa)
	PFICI_07347	Ribosome biogenesis protein RLP24. (205 aa)
	PFICI_08990	Ribosome biogenesis protein BRX1. (311 aa)
	PFICI_08989	Uncharacterized protein. (373 aa)
	PFICI_09289	RNA helicase. (596 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (846 aa)
	PFICI_07760	Uncharacterized protein. (237 aa)
	PFICI_06517	Uncharacterized protein. (364 aa)
	PFICI_08335	Protein MAK16; Belongs to the MAK16 family. (325 aa)
	PFICI_07152	Uncharacterized protein. (787 aa)
	PFICI_04853	ATP-dependent RNA helicase DBP10. (903 aa)
	PFICI_05714	Uncharacterized protein. (717 aa)
	PFICI_02183	Uncharacterized protein. (303 aa)
	PFICI_05908	Rsa3 domain-containing protein. (105 aa)
	PFICI_05917	Zinc finger protein bud20. (119 aa)
	PFICI_04171	Uncharacterized protein. (329 aa)
	PFICI_00823	Brix domain-containing protein. (316 aa)
	PFICI_01091	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (176 aa)
	PFICI_01162	Ribosome biogenesis protein nsa2. (260 aa)
	PFICI_01927	CBF domain-containing protein. (1029 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00823	PFICI_01091	W3XLZ4	W3XMK1	Brix domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.999
PFICI_00823	PFICI_01162	W3XLZ4	W3XMX3	Brix domain-containing protein.	Ribosome biogenesis protein nsa2.	0.863
PFICI_00823	PFICI_01927	W3XLZ4	W3XQ31	Brix domain-containing protein.	CBF domain-containing protein.	0.971
PFICI_00823	PFICI_02183	W3XLZ4	W3XDI1	Brix domain-containing protein.	Uncharacterized protein.	0.863
PFICI_00823	PFICI_04171	W3XLZ4	W3XLK8	Brix domain-containing protein.	Uncharacterized protein.	0.973
PFICI_00823	PFICI_04853	W3XLZ4	W3XC11	Brix domain-containing protein.	ATP-dependent RNA helicase DBP10.	0.892
PFICI_00823	PFICI_05908	W3XLZ4	W3XF31	Brix domain-containing protein.	Rsa3 domain-containing protein.	0.423
PFICI_00823	PFICI_05917	W3XLZ4	W3XFP9	Brix domain-containing protein.	Zinc finger protein bud20.	0.977
PFICI_00823	PFICI_06517	W3XLZ4	W3X638	Brix domain-containing protein.	Uncharacterized protein.	0.863
PFICI_00823	PFICI_07152	W3XLZ4	W3X7W9	Brix domain-containing protein.	Uncharacterized protein.	0.994
PFICI_00823	PFICI_07347	W3XLZ4	W3X121	Brix domain-containing protein.	Ribosome biogenesis protein RLP24.	0.997
PFICI_00823	PFICI_07760	W3XLZ4	W3X4Z7	Brix domain-containing protein.	Uncharacterized protein.	0.830
PFICI_00823	PFICI_08335	W3XLZ4	W3X6K7	Brix domain-containing protein.	Protein MAK16; Belongs to the MAK16 family.	0.976
PFICI_00823	PFICI_08989	W3XLZ4	W3X1U3	Brix domain-containing protein.	Uncharacterized protein.	0.941
PFICI_00823	PFICI_08990	W3XLZ4	W3X160	Brix domain-containing protein.	Ribosome biogenesis protein BRX1.	0.941
PFICI_00823	PFICI_09243	W3XLZ4	W3WZW5	Brix domain-containing protein.	RNA helicase.	0.841
PFICI_00823	PFICI_09289	W3XLZ4	W3X2Q1	Brix domain-containing protein.	RNA helicase.	0.988
PFICI_00823	PFICI_11244	W3XLZ4	W3WU41	Brix domain-containing protein.	Uncharacterized protein.	0.495
PFICI_00823	PFICI_11702	W3XLZ4	W3WR24	Brix domain-containing protein.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.994
PFICI_00823	PFICI_11703	W3XLZ4	W3WU03	Brix domain-containing protein.	Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.	0.982