11 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_01229	DRIM domain-containing protein. (2664 aa)
	PFICI_01317	CBF domain-containing protein. (546 aa)
	PFICI_00693	Uncharacterized protein. (256 aa)
	PFICI_00648	Uncharacterized protein. (206 aa)
	PFICI_00422	Uncharacterized protein. (901 aa)
	PFICI_04503	Uncharacterized protein. (487 aa)
	PFICI_08266	Uncharacterized protein. (280 aa)
	PFICI_08903	Bms1-type G domain-containing protein. (814 aa)
	PFICI_11113	Uncharacterized protein. (435 aa)
	PFICI_12403	Nucleolar protein 9. (717 aa)
	PFICI_15025	RRM domain-containing protein. (370 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00422	PFICI_00693	W3XKQ6	W3XLL2	Uncharacterized protein.	Uncharacterized protein.	0.664
PFICI_00422	PFICI_01229	W3XKQ6	W3XQ72	Uncharacterized protein.	DRIM domain-containing protein.	0.999
PFICI_00422	PFICI_01317	W3XKQ6	W3XNC2	Uncharacterized protein.	CBF domain-containing protein.	0.999
PFICI_00422	PFICI_04503	W3XKQ6	W3XB02	Uncharacterized protein.	Uncharacterized protein.	0.999
PFICI_00422	PFICI_08266	W3XKQ6	W3X5U5	Uncharacterized protein.	Uncharacterized protein.	0.400
PFICI_00422	PFICI_08903	W3XKQ6	W3WYW6	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.936
PFICI_00422	PFICI_11113	W3XKQ6	W3WTY0	Uncharacterized protein.	Uncharacterized protein.	0.941
PFICI_00422	PFICI_12403	W3XKQ6	W3WNT8	Uncharacterized protein.	Nucleolar protein 9.	0.511
PFICI_00422	PFICI_15025	W3XKQ6	W3WHL1	Uncharacterized protein.	RRM domain-containing protein.	0.819
PFICI_00693	PFICI_00422	W3XLL2	W3XKQ6	Uncharacterized protein.	Uncharacterized protein.	0.664
PFICI_00693	PFICI_01229	W3XLL2	W3XQ72	Uncharacterized protein.	DRIM domain-containing protein.	0.454
PFICI_00693	PFICI_01317	W3XLL2	W3XNC2	Uncharacterized protein.	CBF domain-containing protein.	0.860
PFICI_00693	PFICI_04503	W3XLL2	W3XB02	Uncharacterized protein.	Uncharacterized protein.	0.820
PFICI_00693	PFICI_08266	W3XLL2	W3X5U5	Uncharacterized protein.	Uncharacterized protein.	0.400
PFICI_00693	PFICI_08903	W3XLL2	W3WYW6	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.614
PFICI_00693	PFICI_11113	W3XLL2	W3WTY0	Uncharacterized protein.	Uncharacterized protein.	0.611
PFICI_00693	PFICI_12403	W3XLL2	W3WNT8	Uncharacterized protein.	Nucleolar protein 9.	0.439
PFICI_00693	PFICI_15025	W3XLL2	W3WHL1	Uncharacterized protein.	RRM domain-containing protein.	0.989
PFICI_01229	PFICI_00422	W3XQ72	W3XKQ6	DRIM domain-containing protein.	Uncharacterized protein.	0.999
PFICI_01229	PFICI_00693	W3XQ72	W3XLL2	DRIM domain-containing protein.	Uncharacterized protein.	0.454