STRINGSTRING
PFICI_14224 PFICI_14224 PFICI_09211 PFICI_09211 PFICI_09025 PFICI_09025 PFICI_08203 PFICI_08203 PFICI_06204 PFICI_06204 PFICI_01415 PFICI_01415
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PFICI_14224Valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1088 aa)
PFICI_09211Leucine--tRNA ligase. (1123 aa)
PFICI_09025Isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1080 aa)
PFICI_08203Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (954 aa)
PFICI_06204Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (958 aa)
PFICI_01415Valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1097 aa)
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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