(66 nodes) Pectin lyase fold network (Pestalotiopsis fici)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_13772	Endopolygalacturonase C. (377 aa)
	PFICI_04109	Pectin lyase E. (388 aa)
	PFICI_03426	Putative pectin lyase F-1. (389 aa)
	PFICI_03446	Exopolygalacturonase X; Belongs to the glycosyl hydrolase 28 family. (450 aa)
	PFICI_00342	Uncharacterized protein. (2499 aa)
	PFICI_04181	Amb_all domain-containing protein. (407 aa)
	PFICI_01623	Pectin lyase E. (383 aa)
	PFICI_01708	Amb_all domain-containing protein. (377 aa)
	PFICI_01983	Amb_all domain-containing protein. (383 aa)
	PFICI_01680	Pectate_lyase_3 domain-containing protein. (139 aa)
	PFICI_03152	Rhamnogalacturonase A; Belongs to the glycosyl hydrolase 28 family. (460 aa)
	PFICI_03710	Pectinesterase; Involved in maceration and soft-rotting of plant tissue. (327 aa)
	PFICI_03650	Uncharacterized protein. (372 aa)
	PFICI_03067	Pectate lyase F. (262 aa)
	PFICI_03628	Uncharacterized protein. (1383 aa)
	PFICI_03409	Pectin lyase F. (489 aa)
	PFICI_02985	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (314 aa)
	PFICI_02599	Putative endo-xylogalacturonan hydrolase A. (407 aa)
	PFICI_02198	Pectate lyase F. (237 aa)
	PFICI_04733	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (489 aa)
	PFICI_06738	Pectate_lyase_3 domain-containing protein. (1386 aa)
	PFICI_04539	Pectin lyase E. (392 aa)
	PFICI_04426	Glyco_hydro_cc domain-containing protein. (841 aa)
	PFICI_06789	Endopolygalacturonase D. (492 aa)
	PFICI_04221	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (463 aa)
	PFICI_04299	Pectinesterase domain-containing protein. (418 aa)
	PFICI_06619	Pectin lyase B. (380 aa)
	PFICI_06827	Pectin lyase A. (379 aa)
	PFICI_06685	Endopolygalacturonase. (383 aa)
	PFICI_06572	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (367 aa)
	PFICI_08408	Uncharacterized protein. (411 aa)
	PFICI_09205	Polygalacturonase 2. (405 aa)
	PFICI_07562	FAD-binding FR-type domain-containing protein. (1132 aa)
	PFICI_10498	Uncharacterized protein. (497 aa)
	PFICI_10448	Pectin lyase A. (381 aa)
	PFICI_10288	Uncharacterized protein. (766 aa)
	PFICI_10534	Pectate lyase E. (255 aa)
	PFICI_10114	Rhamnogalacturonase C; Belongs to the glycosyl hydrolase 28 family. (445 aa)
	PFICI_08503	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (403 aa)
	PFICI_09959	Endopolygalacturonase 1. (365 aa)
	PFICI_10521	Putative exopolygalacturonase X; Belongs to the glycosyl hydrolase 28 family. (445 aa)
	PFICI_10522	Pectinesterase domain-containing protein. (413 aa)
	PFICI_11396	Amb_all domain-containing protein. (330 aa)
	PFICI_10245	Pectate lyase B. (330 aa)
	PFICI_10202	Pectinesterase. (328 aa)
	PFICI_10220	Uncharacterized protein. (308 aa)
	PFICI_12209	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (422 aa)
	PFICI_11904	Uncharacterized protein. (945 aa)
	PFICI_12635	Pectate lyase D. (258 aa)
	PFICI_11986	Uncharacterized protein. (618 aa)
	PFICI_12480	Uncharacterized protein. (366 aa)
	PFICI_12586	Putative pectin lyase C. (439 aa)
	PFICI_11675	Rhamnogalacturonase B; Belongs to the glycosyl hydrolase 28 family. (557 aa)
	PFICI_13371	Beta_helix domain-containing protein. (393 aa)
	PFICI_12534	Uncharacterized protein. (249 aa)
	PFICI_13251	Uncharacterized protein. (397 aa)
	PFICI_03342	Uncharacterized protein. (830 aa)
	PFICI_14662	Uncharacterized protein. (596 aa)
	PFICI_14647	Uncharacterized protein. (2111 aa)
	PFICI_13249	Pectin lyase E. (381 aa)
	PFICI_13094	Pectate lyase B. (324 aa)
	PFICI_14533	Glucan endo-1,3-beta-glucosidase BGN13.1. (758 aa)
	PFICI_13951	Alpha-L-rhamnosidase rgxB; Belongs to the glycosyl hydrolase 28 family. (427 aa)
	PFICI_14995	Pectate_lyase_3 domain-containing protein. (1538 aa)
	PFICI_14888	Amb_all domain-containing protein. (504 aa)
	PFICI_15365	Pectate lyase C. (426 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_02198	PFICI_03650	W3XDJ8	W3XHX9	Pectate lyase F.	Uncharacterized protein.	0.650
PFICI_02198	PFICI_03710	W3XDJ8	W3XI39	Pectate lyase F.	Pectinesterase; Involved in maceration and soft-rotting of plant tissue.	0.650
PFICI_02198	PFICI_06685	W3XDJ8	W3X6E0	Pectate lyase F.	Endopolygalacturonase.	0.650
PFICI_02198	PFICI_06789	W3XDJ8	W3X8S3	Pectate lyase F.	Endopolygalacturonase D.	0.650
PFICI_02198	PFICI_09205	W3XDJ8	W3X1V5	Pectate lyase F.	Polygalacturonase 2.	0.650
PFICI_02198	PFICI_09959	W3XDJ8	W3WXP0	Pectate lyase F.	Endopolygalacturonase 1.	0.650
PFICI_02198	PFICI_10202	W3XDJ8	W3WWB4	Pectate lyase F.	Pectinesterase.	0.650
PFICI_02198	PFICI_13772	W3XDJ8	W3WM69	Pectate lyase F.	Endopolygalacturonase C.	0.650
PFICI_02599	PFICI_03650	W3XEX7	W3XHX9	Putative endo-xylogalacturonan hydrolase A.	Uncharacterized protein.	0.699
PFICI_02599	PFICI_06685	W3XEX7	W3X6E0	Putative endo-xylogalacturonan hydrolase A.	Endopolygalacturonase.	0.706
PFICI_02599	PFICI_06789	W3XEX7	W3X8S3	Putative endo-xylogalacturonan hydrolase A.	Endopolygalacturonase D.	0.700
PFICI_02599	PFICI_09205	W3XEX7	W3X1V5	Putative endo-xylogalacturonan hydrolase A.	Polygalacturonase 2.	0.692
PFICI_02599	PFICI_09959	W3XEX7	W3WXP0	Putative endo-xylogalacturonan hydrolase A.	Endopolygalacturonase 1.	0.691
PFICI_02599	PFICI_13772	W3XEX7	W3WM69	Putative endo-xylogalacturonan hydrolase A.	Endopolygalacturonase C.	0.692
PFICI_02985	PFICI_03650	W3XG00	W3XHX9	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Uncharacterized protein.	0.671
PFICI_02985	PFICI_06685	W3XG00	W3X6E0	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Endopolygalacturonase.	0.661
PFICI_02985	PFICI_06789	W3XG00	W3X8S3	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Endopolygalacturonase D.	0.671
PFICI_02985	PFICI_09205	W3XG00	W3X1V5	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Polygalacturonase 2.	0.661
PFICI_02985	PFICI_09959	W3XG00	W3WXP0	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Endopolygalacturonase 1.	0.661
PFICI_02985	PFICI_13772	W3XG00	W3WM69	Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.	Endopolygalacturonase C.	0.650