143 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_10129	Uncharacterized protein. (377 aa)
	PFICI_15401	Uncharacterized protein. (760 aa)
	PFICI_15366	ATP-dependent rRNA helicase rrp3; Belongs to the DEAD box helicase family. (526 aa)
	PFICI_15114	Uncharacterized protein. (166 aa)
	PFICI_14915	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
	PFICI_14884	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (144 aa)
	PFICI_14631	HRDC domain-containing protein. (810 aa)
	PFICI_14691	CLP1_P domain-containing protein. (746 aa)
	PFICI_13819	Uncharacterized protein. (817 aa)
	PFICI_14076	WD_REPEATS_REGION domain-containing protein. (441 aa)
	PFICI_14235	Uncharacterized protein. (479 aa)
	PFICI_13317	Uncharacterized protein. (316 aa)
	PFICI_14812	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (119 aa)
	PFICI_13318	40S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	PFICI_14248	Uncharacterized protein. (519 aa)
	PFICI_13684	WD_REPEATS_REGION domain-containing protein. (900 aa)
	PFICI_12259	Nucleolar protein 56. (506 aa)
	PFICI_12783	RNA exonuclease 4. (330 aa)
	PFICI_13590	Uncharacterized protein. (694 aa)
	PFICI_12366	Uncharacterized protein. (539 aa)
	PFICI_11702	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (184 aa)
	PFICI_12596	Uncharacterized protein. (1798 aa)
	PFICI_12082	Uncharacterized protein. (340 aa)
	PFICI_12961	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
	PFICI_12655	60S ribosomal protein L43. (92 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	PFICI_12091	Uncharacterized protein. (591 aa)
	PFICI_12660	HET domain-containing protein. (648 aa)
	PFICI_10929	Uncharacterized protein. (336 aa)
	PFICI_11192	Uncharacterized protein. (499 aa)
	PFICI_11113	Uncharacterized protein. (435 aa)
	PFICI_09915	Casein kinase I; Belongs to the protein kinase superfamily. (371 aa)
	PFICI_10915	WD_REPEATS_REGION domain-containing protein. (906 aa)
	PFICI_11206	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (491 aa)
	PFICI_10260	Uncharacterized protein. (901 aa)
	PFICI_10555	Uncharacterized protein. (173 aa)
	PFICI_08647	Utp12 domain-containing protein. (387 aa)
	PFICI_08821	Uncharacterized protein. (1102 aa)
	PFICI_08803	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (97 aa)
	PFICI_08732	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)
	PFICI_08767	Uncharacterized protein. (1028 aa)
	PFICI_08898	40S ribosomal protein S10-A. (165 aa)
	PFICI_08903	Bms1-type G domain-containing protein. (814 aa)
	PFICI_08902	WD_REPEATS_REGION domain-containing protein. (554 aa)
	PFICI_10544	Pre-rRNA-processing protein IPI1. (353 aa)
	PFICI_09052	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (979 aa)
	PFICI_09166	Nucleolar protein 58. (612 aa)
	PFICI_09453	Sec2p domain-containing protein. (287 aa)
	PFICI_09452	S1 domain-containing protein. (207 aa)
	PFICI_08604	RNase_PH domain-containing protein. (403 aa)
	PFICI_08804	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	PFICI_09060	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	PFICI_07479	60S ribosomal protein L2. (254 aa)
	PFICI_08954	WD_REPEATS_REGION domain-containing protein. (445 aa)
	PFICI_08999	ULP_PROTEASE domain-containing protein. (1100 aa)
	PFICI_07767	ULP_PROTEASE domain-containing protein. (1227 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (292 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (483 aa)
	PFICI_07912	Uncharacterized protein. (218 aa)
	PFICI_07863	40S ribosomal protein S29. (56 aa)
	PFICI_07908	rRNA-processing protein FCF1. (198 aa)
	PFICI_07994	Exosome complex component rrp45. (293 aa)
	PFICI_07968	Uncharacterized protein. (231 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (846 aa)
	PFICI_08113	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	PFICI_07430	Uncharacterized protein. (400 aa)
	PFICI_08258	Uncharacterized protein. (253 aa)
	PFICI_08328	Uncharacterized protein. (1219 aa)
	PFICI_06012	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (714 aa)
	PFICI_07916	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (122 aa)
	PFICI_07926	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (546 aa)
	PFICI_08046	rRNA 2'-O-methyltransferase fibrillarin. (319 aa)
	PFICI_08056	Periodic tryptophan protein 2. (904 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (682 aa)
	PFICI_06196	Uncharacterized protein. (970 aa)
	PFICI_08035	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (156 aa)
	PFICI_06640	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (736 aa)
	PFICI_06622	U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
	PFICI_06825	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (260 aa)
	PFICI_06782	60S ribosomal protein L18-B. (203 aa)
	PFICI_06259	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (276 aa)
	PFICI_06389	ECR1_N domain-containing protein. (329 aa)
	PFICI_07130	Uncharacterized protein. (310 aa)
	PFICI_07212	WD_REPEATS_REGION domain-containing protein. (538 aa)
	PFICI_06438	Tethering factor for nuclear proteasome STS1; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (275 aa)
	PFICI_04211	Uncharacterized protein. (373 aa)
	PFICI_06754	Methyltransf_11 domain-containing protein. (214 aa)
	PFICI_04366	Bms1-type G domain-containing protein. (1139 aa)
	PFICI_06889	U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
	PFICI_07008	Uncharacterized protein. (321 aa)
	PFICI_07133	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
	PFICI_04503	Uncharacterized protein. (487 aa)
	PFICI_05329	RIX1 domain-containing protein. (786 aa)
	PFICI_04502	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
	PFICI_05529	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (147 aa)
	PFICI_05556	ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (553 aa)
	PFICI_05530	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	PFICI_05665	Uncharacterized protein. (1044 aa)
	PFICI_05705	RNase_PH domain-containing protein. (286 aa)
	PFICI_05103	S4 RNA-binding domain-containing protein. (429 aa)
	PFICI_05804	60S ribosomal protein L34-B. (116 aa)
	PFICI_05866	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	PFICI_05891	Sas10 domain-containing protein. (618 aa)
	PFICI_05318	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	PFICI_02198	Pectate lyase F. (237 aa)
	PFICI_05588	40S ribosomal protein S19. (150 aa)
	PFICI_02513	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	PFICI_05642	40S ribosomal protein S17. (168 aa)
	PFICI_02728	Uncharacterized protein. (400 aa)
	PFICI_02733	U3 small nucleolar RNA-associated protein 10. (1803 aa)
	PFICI_02798	Uncharacterized protein. (534 aa)
	PFICI_02870	RTC domain-containing protein. (420 aa)
	PFICI_02990	RNase_PH domain-containing protein. (342 aa)
	PFICI_03029	Uncharacterized protein. (247 aa)
	PFICI_02266	Uncharacterized protein. (218 aa)
	PFICI_03228	40S ribosomal protein S20. (117 aa)
	PFICI_02617	RNase_PH domain-containing protein. (273 aa)
	PFICI_03254	Uncharacterized protein. (287 aa)
	PFICI_02797	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
	PFICI_02892	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (190 aa)
	PFICI_03515	Ribosomal RNA small subunit methyltransferase NEP1. (253 aa)
	PFICI_03067	Pectate lyase F. (262 aa)
	PFICI_02856	40S ribosomal protein S27. (100 aa)
	PFICI_03758	Ribosomal_L28e domain-containing protein. (156 aa)
	PFICI_03546	U3 small nucleolar RNA-associated protein 22. (1065 aa)
	PFICI_00422	Uncharacterized protein. (901 aa)
	PFICI_00428	Uncharacterized protein. (405 aa)
	PFICI_00673	Uncharacterized protein. (360 aa)
	PFICI_00693	Uncharacterized protein. (256 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (762 aa)
	PFICI_00927	40S ribosomal protein S28. (68 aa)
	cnxG	Molybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (95 aa)
	PFICI_00830	WD_REPEATS_REGION domain-containing protein. (598 aa)
	PFICI_01317	CBF domain-containing protein. (546 aa)
	PFICI_00724	Uncharacterized protein. (512 aa)
	PFICI_00985	Pre-rRNA-processing protein PNO1. (262 aa)
	PFICI_01005	Methyltransferase BUD23. (280 aa)
	PFICI_01475	CP-type G domain-containing protein. (544 aa)
	PFICI_01229	DRIM domain-containing protein. (2664 aa)
	PFICI_02012	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	PFICI_02013	WD_REPEATS_REGION domain-containing protein. (962 aa)
	PFICI_01804	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (154 aa)
	PFICI_01899	RNase_PH domain-containing protein. (252 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	W3XM69	W3X565	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PFICI_00422	W3XM69	W3XKQ6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.842
ERB1	PFICI_00428	W3XM69	W3XKS8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.519
ERB1	PFICI_00693	W3XM69	W3XLL2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.992
ERB1	PFICI_00724	W3XM69	W3XNQ7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.662
ERB1	PFICI_00830	W3XM69	W3XNA3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.974
ERB1	PFICI_00985	W3XM69	W3XNS3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pre-rRNA-processing protein PNO1.	0.416
ERB1	PFICI_01229	W3XM69	W3XQ72	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	DRIM domain-containing protein.	0.585
ERB1	PFICI_01317	W3XM69	W3XNC2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CBF domain-containing protein.	0.782
ERB1	PFICI_01475	W3XM69	W3XQ61	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	CP-type G domain-containing protein.	0.999
ERB1	PFICI_02013	W3XM69	W3XQD7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.965
ERB1	PFICI_02198	W3XM69	W3XDJ8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pectate lyase F.	0.661
ERB1	PFICI_02728	W3XM69	W3XF29	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.677
ERB1	PFICI_02733	W3XM69	W3XF34	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar RNA-associated protein 10.	0.921
ERB1	PFICI_02870	W3XM69	W3XFN5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RTC domain-containing protein.	0.466
ERB1	PFICI_03067	W3XM69	W3XHX5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pectate lyase F.	0.661
ERB1	PFICI_03515	W3XM69	W3XHH8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal RNA small subunit methyltransferase NEP1.	0.442
ERB1	PFICI_03546	W3XM69	W3XJT6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar RNA-associated protein 22.	0.833
ERB1	PFICI_04211	W3XM69	W3X8H3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.495
ERB1	PFICI_04366	W3XM69	W3X8X1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Bms1-type G domain-containing protein.	0.856