20 items (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_01504	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (230 aa)
	PFICI_13779	Uncharacterized protein. (409 aa)
	PFICI_14323	Uncharacterized protein. (623 aa)
	PFICI_12538	SEC7 domain-containing protein. (1574 aa)
	PFICI_12616	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	PFICI_11583	COG2 domain-containing protein. (293 aa)
	PFICI_11364	t-SNARE coiled-coil homology domain-containing protein. (177 aa)
	PFICI_01502	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (183 aa)
	PFICI_01123	Cog4 domain-containing protein. (807 aa)
	PFICI_00627	Uncharacterized protein. (444 aa)
	PFICI_03528	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (708 aa)
	PFICI_05727	Synaptobrevin; Belongs to the synaptobrevin family. (196 aa)
	PFICI_01363	Uncharacterized protein. (562 aa)
	PFICI_02220	Uncharacterized protein. (449 aa)
	PFICI_05856	Uncharacterized protein. (765 aa)
	PFICI_07058	t-SNARE coiled-coil homology domain-containing protein. (320 aa)
	PFICI_08355	Uncharacterized protein. (1470 aa)
	PFICI_08295	Uncharacterized protein. (809 aa)
	PFICI_09395	Vesicular-fusion protein sec17. (292 aa)
	PFICI_09233	Uncharacterized protein. (819 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00627	PFICI_01123	W3XLC3	W3XMY6	Uncharacterized protein.	Cog4 domain-containing protein.	0.998
PFICI_00627	PFICI_01504	W3XLC3	W3XR19	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.836
PFICI_00627	PFICI_03528	W3XLC3	W3XHE2	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.999
PFICI_00627	PFICI_05727	W3XLC3	W3XF79	Uncharacterized protein.	Synaptobrevin; Belongs to the synaptobrevin family.	0.817
PFICI_00627	PFICI_05856	W3XLC3	W3XD47	Uncharacterized protein.	Uncharacterized protein.	0.998
PFICI_00627	PFICI_07058	W3XLC3	W3XA55	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.873
PFICI_00627	PFICI_08295	W3XLC3	W3X6H7	Uncharacterized protein.	Uncharacterized protein.	0.998
PFICI_00627	PFICI_09233	W3XLC3	W3WZV7	Uncharacterized protein.	Uncharacterized protein.	0.630
PFICI_00627	PFICI_09395	W3XLC3	W3X2C5	Uncharacterized protein.	Vesicular-fusion protein sec17.	0.645
PFICI_00627	PFICI_11364	W3XLC3	W3WUG5	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.786
PFICI_00627	PFICI_11583	W3XLC3	W3WTN2	Uncharacterized protein.	COG2 domain-containing protein.	0.994
PFICI_00627	PFICI_12616	W3XLC3	W3WRA2	Uncharacterized protein.	Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.	0.809
PFICI_01123	PFICI_00627	W3XMY6	W3XLC3	Cog4 domain-containing protein.	Uncharacterized protein.	0.998
PFICI_01123	PFICI_01504	W3XMY6	W3XR19	Cog4 domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.835
PFICI_01123	PFICI_03528	W3XMY6	W3XHE2	Cog4 domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.998
PFICI_01123	PFICI_05727	W3XMY6	W3XF79	Cog4 domain-containing protein.	Synaptobrevin; Belongs to the synaptobrevin family.	0.834
PFICI_01123	PFICI_05856	W3XMY6	W3XD47	Cog4 domain-containing protein.	Uncharacterized protein.	0.999
PFICI_01123	PFICI_07058	W3XMY6	W3XA55	Cog4 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.873
PFICI_01123	PFICI_08295	W3XMY6	W3X6H7	Cog4 domain-containing protein.	Uncharacterized protein.	0.997
PFICI_01123	PFICI_09233	W3XMY6	W3WZV7	Cog4 domain-containing protein.	Uncharacterized protein.	0.618