STRINGSTRING
PFICI_01121 PFICI_01121 PFICI_12964 PFICI_12964 PFICI_10732 PFICI_10732 PFICI_07693 PFICI_07693 PFICI_09209 PFICI_09209 PFICI_06639 PFICI_06639 PFICI_04245 PFICI_04245 PFICI_07223 PFICI_07223
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PFICI_01121Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (194 aa)
PFICI_12964Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (514 aa)
PFICI_10732AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family. (436 aa)
PFICI_07693AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (447 aa)
PFICI_09209AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (186 aa)
PFICI_06639MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (538 aa)
PFICI_04245AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (116 aa)
PFICI_07223Clat_adaptor_s domain-containing protein. (502 aa)
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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