(5 nodes) Glycerophosphoryl diester phosphodiesterase family network (Pestalotiopsis fici)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PFICI_08616	Ankyrin repeat protein nuc-2. (1021 aa)
	PFICI_07249	GP-PDE domain-containing protein. (375 aa)
	PFICI_00008	Uncharacterized protein. (1045 aa)
	PFICI_11351	Uncharacterized protein. (1166 aa)
	PFICI_00337	Uncharacterized protein. (1375 aa)

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00008	PFICI_00337	W3XJI5	W3XKG6	Uncharacterized protein.	Uncharacterized protein.	0.972
PFICI_00008	PFICI_08616	W3XJI5	W3WY30	Uncharacterized protein.	Ankyrin repeat protein nuc-2.	0.834
PFICI_00008	PFICI_11351	W3XJI5	W3WWH1	Uncharacterized protein.	Uncharacterized protein.	0.973
PFICI_00337	PFICI_00008	W3XKG6	W3XJI5	Uncharacterized protein.	Uncharacterized protein.	0.972
PFICI_00337	PFICI_08616	W3XKG6	W3WY30	Uncharacterized protein.	Ankyrin repeat protein nuc-2.	0.834
PFICI_00337	PFICI_11351	W3XKG6	W3WWH1	Uncharacterized protein.	Uncharacterized protein.	0.973
PFICI_08616	PFICI_00008	W3WY30	W3XJI5	Ankyrin repeat protein nuc-2.	Uncharacterized protein.	0.834
PFICI_08616	PFICI_00337	W3WY30	W3XKG6	Ankyrin repeat protein nuc-2.	Uncharacterized protein.	0.834
PFICI_08616	PFICI_11351	W3WY30	W3WWH1	Ankyrin repeat protein nuc-2.	Uncharacterized protein.	0.834
PFICI_11351	PFICI_00008	W3WWH1	W3XJI5	Uncharacterized protein.	Uncharacterized protein.	0.973
PFICI_11351	PFICI_00337	W3WWH1	W3XKG6	Uncharacterized protein.	Uncharacterized protein.	0.973
PFICI_11351	PFICI_08616	W3WWH1	W3WY30	Uncharacterized protein.	Ankyrin repeat protein nuc-2.	0.834