(6 nodes) t-UTP complex, and Endonucleolytic cleavage in 5-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) network (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10012865	U3 small nucleolar RNA-associated protein 15. (528 aa)
	FOC1_g10013603	U3 small nucleolar RNA-associated protein 10. (720 aa)
	FOC1_g10016166	U3 small nucleolar RNA-associated protein 17. (962 aa)
	FOC1_g10016504	U3 small nucleolar RNA-associated protein 4. (879 aa)
	FOC1_g10007223	Putative U3 small nucleolar RNA-associated protein 7. (552 aa)
	FOC1_g10007202	U3 small nucleolar RNA-associated protein 5. (391 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10007202	FOC1_g10007223	N4URX8	N4UE64	U3 small nucleolar RNA-associated protein 5.	Putative U3 small nucleolar RNA-associated protein 7.	0.998
FOC1_g10007202	FOC1_g10012865	N4URX8	N4TGX9	U3 small nucleolar RNA-associated protein 5.	U3 small nucleolar RNA-associated protein 15.	0.999
FOC1_g10007202	FOC1_g10013603	N4URX8	N4TLD0	U3 small nucleolar RNA-associated protein 5.	U3 small nucleolar RNA-associated protein 10.	0.999
FOC1_g10007202	FOC1_g10016166	N4URX8	N4TQ82	U3 small nucleolar RNA-associated protein 5.	U3 small nucleolar RNA-associated protein 17.	0.999
FOC1_g10007202	FOC1_g10016504	N4URX8	N4TVN4	U3 small nucleolar RNA-associated protein 5.	U3 small nucleolar RNA-associated protein 4.	0.999
FOC1_g10007223	FOC1_g10007202	N4UE64	N4URX8	Putative U3 small nucleolar RNA-associated protein 7.	U3 small nucleolar RNA-associated protein 5.	0.998
FOC1_g10007223	FOC1_g10012865	N4UE64	N4TGX9	Putative U3 small nucleolar RNA-associated protein 7.	U3 small nucleolar RNA-associated protein 15.	0.998
FOC1_g10007223	FOC1_g10013603	N4UE64	N4TLD0	Putative U3 small nucleolar RNA-associated protein 7.	U3 small nucleolar RNA-associated protein 10.	0.999
FOC1_g10007223	FOC1_g10016166	N4UE64	N4TQ82	Putative U3 small nucleolar RNA-associated protein 7.	U3 small nucleolar RNA-associated protein 17.	0.999
FOC1_g10007223	FOC1_g10016504	N4UE64	N4TVN4	Putative U3 small nucleolar RNA-associated protein 7.	U3 small nucleolar RNA-associated protein 4.	0.999
FOC1_g10012865	FOC1_g10007202	N4TGX9	N4URX8	U3 small nucleolar RNA-associated protein 15.	U3 small nucleolar RNA-associated protein 5.	0.999
FOC1_g10012865	FOC1_g10007223	N4TGX9	N4UE64	U3 small nucleolar RNA-associated protein 15.	Putative U3 small nucleolar RNA-associated protein 7.	0.998
FOC1_g10012865	FOC1_g10013603	N4TGX9	N4TLD0	U3 small nucleolar RNA-associated protein 15.	U3 small nucleolar RNA-associated protein 10.	0.999
FOC1_g10012865	FOC1_g10016166	N4TGX9	N4TQ82	U3 small nucleolar RNA-associated protein 15.	U3 small nucleolar RNA-associated protein 17.	0.999
FOC1_g10012865	FOC1_g10016504	N4TGX9	N4TVN4	U3 small nucleolar RNA-associated protein 15.	U3 small nucleolar RNA-associated protein 4.	0.999
FOC1_g10013603	FOC1_g10007202	N4TLD0	N4URX8	U3 small nucleolar RNA-associated protein 10.	U3 small nucleolar RNA-associated protein 5.	0.999
FOC1_g10013603	FOC1_g10007223	N4TLD0	N4UE64	U3 small nucleolar RNA-associated protein 10.	Putative U3 small nucleolar RNA-associated protein 7.	0.999
FOC1_g10013603	FOC1_g10012865	N4TLD0	N4TGX9	U3 small nucleolar RNA-associated protein 10.	U3 small nucleolar RNA-associated protein 15.	0.999
FOC1_g10013603	FOC1_g10016166	N4TLD0	N4TQ82	U3 small nucleolar RNA-associated protein 10.	U3 small nucleolar RNA-associated protein 17.	0.999
FOC1_g10013603	FOC1_g10016504	N4TLD0	N4TVN4	U3 small nucleolar RNA-associated protein 10.	U3 small nucleolar RNA-associated protein 4.	0.999