10 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10010471	Guanine nucleotide-binding protein subunit beta. (367 aa)
	FOC1_g10008659	Protein kinase byr2. (860 aa)
	FOC1_g10014059	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (355 aa)
	FOC1_g10012967	Dual specificity protein kinase FUZ7. (516 aa)
	FOC1_g10012774	Guanine nucleotide-binding protein alpha-2 subunit. (354 aa)
	FOC1_g10013911	Non-specific serine/threonine protein kinase. (858 aa)
	FOC1_g10011279	Non-specific serine/threonine protein kinase. (843 aa)
	FOC1_g10010468	Protein STE50. (493 aa)
	FOC1_g10010478	Protein phosphatase 2C like protein 1. (509 aa)
	FOC1_g10009949	Uncharacterized protein. (380 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10008659	FOC1_g10009949	N4UBG6	N4UWI3	Protein kinase byr2.	Uncharacterized protein.	0.491
FOC1_g10008659	FOC1_g10010468	N4UBG6	N4UUX6	Protein kinase byr2.	Protein STE50.	0.987
FOC1_g10008659	FOC1_g10010471	N4UBG6	N4UY91	Protein kinase byr2.	Guanine nucleotide-binding protein subunit beta.	0.678
FOC1_g10008659	FOC1_g10010478	N4UBG6	N4UUY3	Protein kinase byr2.	Protein phosphatase 2C like protein 1.	0.658
FOC1_g10008659	FOC1_g10011279	N4UBG6	N4UDT3	Protein kinase byr2.	Non-specific serine/threonine protein kinase.	0.930
FOC1_g10008659	FOC1_g10012774	N4UBG6	N4TXZ5	Protein kinase byr2.	Guanine nucleotide-binding protein alpha-2 subunit.	0.569
FOC1_g10008659	FOC1_g10012967	N4UBG6	N4TJD5	Protein kinase byr2.	Dual specificity protein kinase FUZ7.	0.989
FOC1_g10008659	FOC1_g10013911	N4UBG6	N4TZN3	Protein kinase byr2.	Non-specific serine/threonine protein kinase.	0.930
FOC1_g10008659	FOC1_g10014059	N4UBG6	N4UA45	Protein kinase byr2.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.907
FOC1_g10009949	FOC1_g10008659	N4UWI3	N4UBG6	Uncharacterized protein.	Protein kinase byr2.	0.491
FOC1_g10009949	FOC1_g10010471	N4UWI3	N4UY91	Uncharacterized protein.	Guanine nucleotide-binding protein subunit beta.	0.959
FOC1_g10009949	FOC1_g10012774	N4UWI3	N4TXZ5	Uncharacterized protein.	Guanine nucleotide-binding protein alpha-2 subunit.	0.841
FOC1_g10009949	FOC1_g10012967	N4UWI3	N4TJD5	Uncharacterized protein.	Dual specificity protein kinase FUZ7.	0.542
FOC1_g10009949	FOC1_g10014059	N4UWI3	N4UA45	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.643
FOC1_g10010468	FOC1_g10008659	N4UUX6	N4UBG6	Protein STE50.	Protein kinase byr2.	0.987
FOC1_g10010468	FOC1_g10010471	N4UUX6	N4UY91	Protein STE50.	Guanine nucleotide-binding protein subunit beta.	0.619
FOC1_g10010468	FOC1_g10011279	N4UUX6	N4UDT3	Protein STE50.	Non-specific serine/threonine protein kinase.	0.411
FOC1_g10010468	FOC1_g10012967	N4UUX6	N4TJD5	Protein STE50.	Dual specificity protein kinase FUZ7.	0.554
FOC1_g10010468	FOC1_g10013911	N4UUX6	N4TZN3	Protein STE50.	Non-specific serine/threonine protein kinase.	0.411
FOC1_g10010468	FOC1_g10014059	N4UUX6	N4UA45	Protein STE50.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.660