48 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10015524	60S ribosomal protein L9-B. (193 aa)
	FOC1_g10016157	Multiple RNA-binding domain-containing protein 1. (852 aa)
	FOC1_g10015500	Ribosome biogenesis protein RPF2. (317 aa)
	FOC1_g10015596	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (173 aa)
	FOC1_g10014700	Uncharacterized protein. (283 aa)
	FOC1_g10016040	54S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family. (252 aa)
	FOC1_g10016450	60S ribosomal protein L23-B; Belongs to the universal ribosomal protein uL14 family. (143 aa)
	FOC1_g10014701	Uncharacterized protein. (344 aa)
	FOC1_g10012941	U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
	FOC1_g10014927	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
	FOC1_g10012839	60S ribosomal protein L5. (302 aa)
	FOC1_g10014015	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	FOC1_g10014880	Ribosomal protein L37; Binds to the 23S rRNA. (100 aa)
	FOC1_g10008168	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
	FOC1_g10015916	rRNA-processing protein utp23. (288 aa)
	FOC1_g10006670	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (152 aa)
	FOC1_g10016307	Uncharacterized protein. (306 aa)
	FOC1_g10010976	37S ribosomal protein RSM18, mitochondrial. (212 aa)
	FOC1_g10014791	37S ribosomal protein S7, mitochondrial. (351 aa)
	FOC1_g10010977	U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
	FOC1_g10016308	40S ribosomal protein S11-B; Belongs to the universal ribosomal protein uS17 family. (167 aa)
	FOC1_g10013523	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
	FOC1_g10014478	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	FOC1_g10013763	60S acidic ribosomal protein P0. (382 aa)
	FOC1_g10013840	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (156 aa)
	FOC1_g10000246	Ribosomal RNA-processing protein 7. (313 aa)
	FOC1_g10009382	54S ribosomal protein L38, mitochondrial; Belongs to the universal ribosomal protein uL14 family. (131 aa)
	FOC1_g10002038	Uncharacterized protein. (237 aa)
	FOC1_g10013880	60S ribosomal protein L2. (214 aa)
	FOC1_g10008117	rRNA biogenesis protein rrp5. (1760 aa)
	FOC1_g10008293	37S ribosomal protein MRP17, mitochondrial. (118 aa)
	FOC1_g10014031	Ribosomal RNA small subunit methyltransferase NEP1. (259 aa)
	FOC1_g10011071	37S ribosomal protein NAM9, mitochondrial. (528 aa)
	FOC1_g10014032	37S ribosomal protein S17, mitochondrial. (168 aa)
	FOC1_g10010054	Ribonuclease MRP protein subunit rmp1. (267 aa)
	FOC1_g10008455	40S ribosomal protein S9. (191 aa)
	FOC1_g10010293	60S ribosomal protein L19, mitochondrial; Belongs to the universal ribosomal protein uL11 family. (154 aa)
	FOC1_g10009329	Uncharacterized protein. (495 aa)
	FOC1_g10007318	F-box domain-containing protein. (431 aa)
	FOC1_g10008636	Ribosome production factor 1. (415 aa)
	FOC1_g10010012	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	FOC1_g10013026	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (607 aa)
	FOC1_g10010370	Brix domain-containing protein C1B9.03c. (418 aa)
	FOC1_g10011240	54S ribosomal protein L6, mitochondrial; Belongs to the universal ribosomal protein uL6 family. (260 aa)
	FOC1_g10002938	Uncharacterized protein. (118 aa)
	FOC1_g10009742	30S ribosomal protein S15. (318 aa)
	FOC1_g10010060	60S ribosomal protein L25. (153 aa)
	FOC1_g10007317	Ribosome biogenesis protein BRX1. (307 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10000246	FOC1_g10002038	N4U0E0	N4U2G3	Ribosomal RNA-processing protein 7.	Uncharacterized protein.	0.967
FOC1_g10000246	FOC1_g10002938	N4U0E0	N4UVS5	Ribosomal RNA-processing protein 7.	Uncharacterized protein.	0.590
FOC1_g10000246	FOC1_g10007317	N4U0E0	N4UZF4	Ribosomal RNA-processing protein 7.	Ribosome biogenesis protein BRX1.	0.737
FOC1_g10000246	FOC1_g10007318	N4U0E0	N4US87	Ribosomal RNA-processing protein 7.	F-box domain-containing protein.	0.737
FOC1_g10000246	FOC1_g10008117	N4U0E0	N4U828	Ribosomal RNA-processing protein 7.	rRNA biogenesis protein rrp5.	0.995
FOC1_g10000246	FOC1_g10008168	N4U0E0	N4TTK0	Ribosomal RNA-processing protein 7.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.590
FOC1_g10000246	FOC1_g10008455	N4U0E0	N4UIC4	Ribosomal RNA-processing protein 7.	40S ribosomal protein S9.	0.981
FOC1_g10000246	FOC1_g10008636	N4U0E0	N4USS2	Ribosomal RNA-processing protein 7.	Ribosome production factor 1.	0.820
FOC1_g10000246	FOC1_g10009742	N4U0E0	N4UW68	Ribosomal RNA-processing protein 7.	30S ribosomal protein S15.	0.963
FOC1_g10000246	FOC1_g10010012	N4U0E0	N4UTG4	Ribosomal RNA-processing protein 7.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.972
FOC1_g10000246	FOC1_g10010370	N4U0E0	N4UUM6	Ribosomal RNA-processing protein 7.	Brix domain-containing protein C1B9.03c.	0.765
FOC1_g10000246	FOC1_g10010977	N4U0E0	N4TXU9	Ribosomal RNA-processing protein 7.	U3 small nucleolar ribonucleoprotein IMP3.	0.993
FOC1_g10000246	FOC1_g10011071	N4U0E0	N4UEU1	Ribosomal RNA-processing protein 7.	37S ribosomal protein NAM9, mitochondrial.	0.976
FOC1_g10000246	FOC1_g10012941	N4U0E0	N4TH30	Ribosomal RNA-processing protein 7.	U3 small nucleolar ribonucleoprotein IMP4.	0.993
FOC1_g10000246	FOC1_g10013026	N4U0E0	N4UU93	Ribosomal RNA-processing protein 7.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.410
FOC1_g10000246	FOC1_g10013523	N4U0E0	N4TYG6	Ribosomal RNA-processing protein 7.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.889
FOC1_g10000246	FOC1_g10013763	N4U0E0	N4TZ83	Ribosomal RNA-processing protein 7.	60S acidic ribosomal protein P0.	0.703
FOC1_g10000246	FOC1_g10013840	N4U0E0	N4TZI1	Ribosomal RNA-processing protein 7.	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.906
FOC1_g10000246	FOC1_g10014015	N4U0E0	N4TPP3	Ribosomal RNA-processing protein 7.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.968
FOC1_g10000246	FOC1_g10014031	N4U0E0	N4UE02	Ribosomal RNA-processing protein 7.	Ribosomal RNA small subunit methyltransferase NEP1.	0.983