36 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10012674	Flavin carrier protein 2. (756 aa)
	FOC1_g10008735	H(+)/Cl(-) exchange transporter 3. (864 aa)
	FOC1_g10011863	Putative membrane protein C24H6.13. (1012 aa)
	FOC1_g10012030	Outward-rectifier potassium channel TOK1; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (710 aa)
	FOC1_g10010153	Uncharacterized protein. (340 aa)
	FOC1_g10012512	Uncharacterized protein. (290 aa)
	FOC1_g10007855	Uncharacterized protein. (356 aa)
	FOC1_g10006950	Uncharacterized protein. (439 aa)
	FOC1_g10003412	Uncharacterized protein. (160 aa)
	FOC1_g10015364	Uncharacterized protein. (710 aa)
	FOC1_g10002260	Chloride channel protein. (742 aa)
	FOC1_g10010711	Exoglucanase 1. (389 aa)
	FOC1_g10003092	Calcium-channel protein cch1. (2080 aa)
	FOC1_g10011098	Chloride channel protein. (823 aa)
	FOC1_g10016090	Mechanosensitive ion channel protein. (870 aa)
	FOC1_g10014526	Mechanosensitive ion channel protein. (860 aa)
	FOC1_g10007321	Uncharacterized protein. (267 aa)
	FOC1_g10013258	Uncharacterized protein. (1131 aa)
	FOC1_g10010385	Uncharacterized protein. (1013 aa)
	FOC1_g10010547	Calcium channel YVC1. (691 aa)
	FOC1_g10008622	Chloride channel protein. (905 aa)
	FOC1_g10004933	Exoglucanase 3. (407 aa)
	FOC1_g10002902	Flavin carrier protein 1. (648 aa)
	FOC1_g10005306	Uncharacterized protein. (462 aa)
	FOC1_g10003735	Outward-rectifier potassium channel TOK1; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (656 aa)
	FOC1_g10008302	Uncharacterized protein. (668 aa)
	FOC1_g10003433	Uncharacterized protein. (519 aa)
	FOC1_g10012454	Phototropin-1. (664 aa)
	FOC1_g10015935	Nitrate/nitrite transporter. (513 aa)
	FOC1_g10012937	Mitochondrial outer membrane protein porin. (283 aa)
	FOC1_g10009169	Uncharacterized protein. (998 aa)
	FOC1_g10008130	Golgi pH regulator. (546 aa)
	FOC1_g10002158	Transient receptor potential channel pyrexia. (1117 aa)
	FOC1_g10012508	Uncharacterized protein. (892 aa)
	FOC1_h10016686	Uncharacterized protein. (858 aa)
	FOC1_g10012733	Anucleate primary sterigmata protein A. (1362 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10002158	FOC1_g10003092	N4U5I5	N4USP1	Transient receptor potential channel pyrexia.	Calcium-channel protein cch1.	0.478
FOC1_g10002260	FOC1_g10008622	N4TWM3	N4UWJ2	Chloride channel protein.	Chloride channel protein.	0.580
FOC1_g10003092	FOC1_g10002158	N4USP1	N4U5I5	Calcium-channel protein cch1.	Transient receptor potential channel pyrexia.	0.478
FOC1_g10003092	FOC1_g10007855	N4USP1	N4UNG4	Calcium-channel protein cch1.	Uncharacterized protein.	0.732
FOC1_g10003092	FOC1_g10010547	N4USP1	N4UYF4	Calcium-channel protein cch1.	Calcium channel YVC1.	0.515
FOC1_g10003092	FOC1_g10012454	N4USP1	N4U5U5	Calcium-channel protein cch1.	Phototropin-1.	0.729
FOC1_g10003092	FOC1_g10013258	N4USP1	N4UV11	Calcium-channel protein cch1.	Uncharacterized protein.	0.808
FOC1_g10003092	FOC1_g10015364	N4USP1	N4TVI7	Calcium-channel protein cch1.	Uncharacterized protein.	0.808
FOC1_g10003735	FOC1_g10012454	N4U9N7	N4U5U5	Outward-rectifier potassium channel TOK1; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.	Phototropin-1.	0.408
FOC1_g10006950	FOC1_g10007855	N4TS12	N4UNG4	Uncharacterized protein.	Uncharacterized protein.	0.732
FOC1_g10006950	FOC1_g10012454	N4TS12	N4U5U5	Uncharacterized protein.	Phototropin-1.	0.670
FOC1_g10006950	FOC1_g10013258	N4TS12	N4UV11	Uncharacterized protein.	Uncharacterized protein.	0.808
FOC1_g10006950	FOC1_g10015364	N4TS12	N4TVI7	Uncharacterized protein.	Uncharacterized protein.	0.808
FOC1_g10007321	FOC1_g10007855	N4UVM6	N4UNG4	Uncharacterized protein.	Uncharacterized protein.	0.732
FOC1_g10007321	FOC1_g10012454	N4UVM6	N4U5U5	Uncharacterized protein.	Phototropin-1.	0.670
FOC1_g10007321	FOC1_g10013258	N4UVM6	N4UV11	Uncharacterized protein.	Uncharacterized protein.	0.808
FOC1_g10007321	FOC1_g10015364	N4UVM6	N4TVI7	Uncharacterized protein.	Uncharacterized protein.	0.808
FOC1_g10007855	FOC1_g10003092	N4UNG4	N4USP1	Uncharacterized protein.	Calcium-channel protein cch1.	0.732
FOC1_g10007855	FOC1_g10006950	N4UNG4	N4TS12	Uncharacterized protein.	Uncharacterized protein.	0.732
FOC1_g10007855	FOC1_g10007321	N4UNG4	N4UVM6	Uncharacterized protein.	Uncharacterized protein.	0.732