STRINGSTRING
FOC1_g10016002 FOC1_g10016002 FOC1_g10016142 FOC1_g10016142 FOC1_g10016157 FOC1_g10016157 FOC1_g10016243 FOC1_g10016243 FOC1_g10016280 FOC1_g10016280 FOC1_g10015399 FOC1_g10015399 FOC1_g10015404 FOC1_g10015404 FOC1_g10015500 FOC1_g10015500 FOC1_g10014851 FOC1_g10014851 FOC1_g10015956 FOC1_g10015956 FOC1_g10015963 FOC1_g10015963 FOC1_g10016025 FOC1_g10016025 FOC1_g10016254 FOC1_g10016254 FOC1_g10012666 FOC1_g10012666 NAT10 NAT10 FOC1_g10016445 FOC1_g10016445 FOC1_g10014726 FOC1_g10014726 FOC1_g10012813 FOC1_g10012813 FOC1_g10012865 FOC1_g10012865 FOC1_g10012941 FOC1_g10012941 FOC1_g10006732 FOC1_g10006732 FOC1_g10009081 FOC1_g10009081 FOC1_g10009254 FOC1_g10009254 FOC1_g10012788 FOC1_g10012788 FOC1_g10012839 FOC1_g10012839 FOC1_g10002011 FOC1_g10002011 FOC1_g10008091 FOC1_g10008091 FOC1_g10009107 FOC1_g10009107 FOC1_g10013603 FOC1_g10013603 FOC1_g10013638 FOC1_g10013638 FOC1_g10013724 FOC1_g10013724 FOC1_g10013841 FOC1_g10013841 rpl10a rpl10a FOC1_g10001315 FOC1_g10001315 FOC1_g10013475 FOC1_g10013475 FOC1_g10015488 FOC1_g10015488 FOC1_g10013599 FOC1_g10013599 FOC1_g10013639 FOC1_g10013639 FOC1_g10015584 FOC1_g10015584 FOC1_g10015661 FOC1_g10015661 FOC1_g10015687 FOC1_g10015687 FOC1_g10013730 FOC1_g10013730 FOC1_g10013735 FOC1_g10013735 LSM5 LSM5 FOC1_g10013919 FOC1_g10013919 FOC1_g10006871 FOC1_g10006871 FOC1_g10015903 FOC1_g10015903 FOC1_g10014015 FOC1_g10014015 FOC1_g10006928 FOC1_g10006928 FOC1_g10005139 FOC1_g10005139 FOC1_g10016166 FOC1_g10016166 FOC1_g10016511 FOC1_g10016511 FOC1_g10006887 FOC1_g10006887 FOC1_g10014970 FOC1_g10014970 FOC1_g10015000 FOC1_g10015000 FOC1_g10015005 FOC1_g10015005 FOC1_g10005109 FOC1_g10005109 FOC1_g10015010 FOC1_g10015010 FOC1_g10005228 FOC1_g10005228 FOC1_g10015511 FOC1_g10015511 FOC1_g10015541 FOC1_g10015541 FOC1_g10015546 FOC1_g10015546 FOC1_g10015577 FOC1_g10015577 FOC1_g10015587 FOC1_g10015587 FOC1_g10008126 FOC1_g10008126 FOC1_g10008168 FOC1_g10008168 FOC1_g10015786 FOC1_g10015786 FOC1_g10012884 FOC1_g10012884 FOC1_g10008301 FOC1_g10008301 LSM8 LSM8 FOC1_g10015916 FOC1_g10015916 FOC1_g10015989 FOC1_g10015989 FOC1_g10016124 FOC1_g10016124 ERB1 ERB1 FOC1_g10016255 FOC1_g10016255 FOC1_g10009157 FOC1_g10009157 FOC1_g10010941 FOC1_g10010941 FOC1_g10016477 FOC1_g10016477 FOC1_g10016504 FOC1_g10016504 FOC1_g10014767 FOC1_g10014767 FOC1_g10015573 FOC1_g10015573 FOC1_g10014791 FOC1_g10014791 FOC1_g10015782 FOC1_g10015782 FOC1_g10004260 FOC1_g10004260 FOC1_g10015867 FOC1_g10015867 TSR3 TSR3 FOC1_g10014106 FOC1_g10014106 FOC1_g10014217 FOC1_g10014217 FOC1_g10010977 FOC1_g10010977 FOC1_g10016256 FOC1_g10016256 FOC1_g10014274 FOC1_g10014274 NOP7 NOP7 FOC1_g10014333 FOC1_g10014333 FOC1_g10012908 FOC1_g10012908 FOC1_g10013514 FOC1_g10013514 FOC1_g10013523 FOC1_g10013523 FOC1_g10014478 FOC1_g10014478 FOC1_g10013642 FOC1_g10013642 FOC1_g10013738 FOC1_g10013738 FOC1_g10003805 FOC1_g10003805 FOC1_g10002047 FOC1_g10002047 FOC1_g10013763 FOC1_g10013763 FOC1_g10010122 FOC1_g10010122 FOC1_g10014854 FOC1_g10014854 FOC1_g10013916 FOC1_g10013916 FOC1_g10014192 FOC1_g10014192 FOC1_g10014003 FOC1_g10014003 FOC1_g10014269 FOC1_g10014269 FOC1_g10015107 FOC1_g10015107 FOC1_g10000246 FOC1_g10000246 FOC1_g10014424 FOC1_g10014424 FOC1_g10014449 FOC1_g10014449 FOC1_g10011701 FOC1_g10011701 FOC1_g10001319 FOC1_g10001319 FOC1_g10014674 FOC1_g10014674 FOC1_g10012790 FOC1_g10012790 FOC1_g10012994 FOC1_g10012994 FOC1_g10013005 FOC1_g10013005 FOC1_g10009500 FOC1_g10009500 FOC1_g10002038 FOC1_g10002038 FOC1_g10006624 FOC1_g10006624 FOC1_g10006725 FOC1_g10006725 FOC1_g10013640 FOC1_g10013640 FOC1_g10013655 FOC1_g10013655 FOC1_g10002656 FOC1_g10002656 FOC1_g10013686 FOC1_g10013686 FOC1_g10013711 FOC1_g10013711 FOC1_g10002720 FOC1_g10002720 FOC1_g10009294 FOC1_g10009294 FOC1_g10012468 FOC1_g10012468 FOC1_g10013920 FOC1_g10013920 FOC1_g10013930 FOC1_g10013930 FOC1_g10009449 FOC1_g10009449 LSM3 LSM3 FOC1_g10008404 FOC1_g10008404 FOC1_g10012469 FOC1_g10012469 FOC1_g10013542 FOC1_g10013542 FOC1_g10006817 FOC1_g10006817 FOC1_g10006822 FOC1_g10006822 FOC1_g10005002 FOC1_g10005002 FOC1_g10013727 FOC1_g10013727 YTM1 YTM1 FOC1_g10002764 FOC1_g10002764 FOC1_g10002800 FOC1_g10002800 FOC1_g10013942 FOC1_g10013942 FOC1_g10008415 FOC1_g10008415 FOC1_g10014007 FOC1_g10014007 FOC1_g10003105 FOC1_g10003105 FOC1_g10003130 FOC1_g10003130 FOC1_g10006101 FOC1_g10006101 FOC1_g10008117 FOC1_g10008117 FOC1_g10008148 FOC1_g10008148 FOC1_g10005901 FOC1_g10005901 FOC1_g10008262 FOC1_g10008262 FOC1_g10005911 FOC1_g10005911 FOC1_g10005823 FOC1_g10005823 FOC1_g10002264 FOC1_g10002264 FOC1_g10006847 FOC1_g10006847 FOC1_g10003116 FOC1_g10003116 FOC1_g10013210 FOC1_g10013210 FOC1_g10005127 FOC1_g10005127 FOC1_g10005210 FOC1_g10005210 FOC1_g10014090 FOC1_g10014090 FOC1_g10014100 FOC1_g10014100 FOC1_g10014210 FOC1_g10014210 FOC1_g10009744 FOC1_g10009744 FOC1_g10014391 FOC1_g10014391 FOC1_g10008594 FOC1_g10008594 FOC1_g10008150 FOC1_g10008150 FOC1_g10008664 FOC1_g10008664 FOC1_g10008679 FOC1_g10008679 FOC1_g10014535 FOC1_g10014535 FOC1_g10014555 FOC1_g10014555 FOC1_g10008734 FOC1_g10008734 FOC1_g10013288 FOC1_g10013288 FOC1_g10008268 FOC1_g10008268 FOC1_g10009527 FOC1_g10009527 FOC1_g10009576 FOC1_g10009576 FOC1_g10010938 FOC1_g10010938 FOC1_g10010249 FOC1_g10010249 FOC1_g10010263 FOC1_g10010263 FOC1_g10011003 FOC1_g10011003 FOC1_g10010294 FOC1_g10010294 FOC1_g10009715 FOC1_g10009715 FOC1_g10010338 FOC1_g10010338 FOC1_g10009730 FOC1_g10009730 FOC1_g10008635 FOC1_g10008635 FOC1_g10008740 FOC1_g10008740 FOC1_g10002267 FOC1_g10002267 FOC1_g10011228 FOC1_g10011228 FOC1_g10014031 FOC1_g10014031 FOC1_g10007223 FOC1_g10007223 FOC1_g10014173 FOC1_g10014173 FOC1_g10014178 FOC1_g10014178 FOC1_g10014255 FOC1_g10014255 FOC1_g10009350 FOC1_g10009350 FOC1_g10011061 FOC1_g10011061 FOC1_g10014380 FOC1_g10014380 FOC1_g10010773 FOC1_g10010773 FOC1_g10009967 FOC1_g10009967 FOC1_g10010058 FOC1_g10010058 FOC1_g10007224 FOC1_g10007224 FOC1_g10011004 FOC1_g10011004 FOC1_g10010104 FOC1_g10010104 FOC1_g10010109 FOC1_g10010109 FOC1_g10012245 FOC1_g10012245 FOC1_g10010188 FOC1_g10010188 FOC1_g10001864 FOC1_g10001864 FOC1_g10005286 FOC1_g10005286 FOC1_g10010287 FOC1_g10010287 FOC1_g10005369 FOC1_g10005369 FOC1_g10004747 FOC1_g10004747 FOC1_g10010371 FOC1_g10010371 FOC1_g10002263 FOC1_g10002263 FOC1_g10002273 FOC1_g10002273 FOC1_g10010004 FOC1_g10010004 FOC1_g10015388 FOC1_g10015388 FOC1_g10014027 FOC1_g10014027 FOC1_g10010054 FOC1_g10010054 FOC1_g10014042 FOC1_g10014042 FOC1_g10010658 FOC1_g10010658 FOC1_g10014073 FOC1_g10014073 FOC1_g10011866 FOC1_g10011866 FOC1_g10014134 FOC1_g10014134 FOC1_g10010382 FOC1_g10010382 FOC1_g10008499 FOC1_g10008499 FOC1_g10010515 FOC1_g10010515 FOC1_g10010632 FOC1_g10010632 FOC1_g10002515 FOC1_g10002515 FOC1_g10010342 FOC1_g10010342 FOC1_g10012430 FOC1_g10012430 FOC1_g10012583 FOC1_g10012583 FOC1_g10012136 FOC1_g10012136 FOC1_g10008396 FOC1_g10008396 FOC1_g10008422 FOC1_g10008422 FOC1_g10013254 FOC1_g10013254 FOC1_g10012244 FOC1_g10012244 TIF6 TIF6 FOC1_g10008603 FOC1_g10008603 FOC1_g10008633 FOC1_g10008633 FOC1_g10006558 FOC1_g10006558 FOC1_g10013095 FOC1_g10013095 FOC1_g10001429 FOC1_g10001429 FOC1_g10007202 FOC1_g10007202 FOC1_g10009676 FOC1_g10009676 FOC1_g10007287 FOC1_g10007287 FOC1_g10007318 FOC1_g10007318 RPS0 RPS0 FOC1_g10003103 FOC1_g10003103 FOC1_g10008636 FOC1_g10008636 FOC1_g10008671 FOC1_g10008671 FOC1_g10010012 FOC1_g10010012 FOC1_g10010042 FOC1_g10010042 FOC1_g10003218 FOC1_g10003218 FOC1_g10013026 FOC1_g10013026 FOC1_g10011103 FOC1_g10011103 FOC1_g10010370 FOC1_g10010370 FOC1_g10013157 FOC1_g10013157 FOC1_g10010431 FOC1_g10010431 FOC1_g10010549 FOC1_g10010549 FOC1_g10010554 FOC1_g10010554 FOC1_g10013323 FOC1_g10013323 FOC1_g10009529 FOC1_g10009529 FOC1_g10002938 FOC1_g10002938 FOC1_g10009712 FOC1_g10009712 FOC1_g10009732 FOC1_g10009732 FOC1_g10008687 FOC1_g10008687 FOC1_g10010060 FOC1_g10010060 LSM4 LSM4 FOC1_g10010567 FOC1_g10010567 FOC1_g10007236 FOC1_g10007236 FOC1_g10007317 FOC1_g10007317 FOC1_g10010011 FOC1_g10010011 FOC1_g10010041 FOC1_g10010041 FOC1_g10003573 FOC1_g10003573 FOC1_g10010497 FOC1_g10010497 FOC1_g10010502 FOC1_g10010502 FOC1_g10015549 FOC1_g10015549 FOC1_g10015667 FOC1_g10015667 FOC1_g10015804 FOC1_g10015804 FOC1_g10015894 FOC1_g10015894 FOC1_g10015972 FOC1_g10015972
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FOC1_g10016002U6 snRNA-associated Sm-like protein LSm2. (137 aa)
FOC1_g10016142ATP-dependent RNA helicase ROK1. (693 aa)
FOC1_g10016157Multiple RNA-binding domain-containing protein 1. (852 aa)
FOC1_g10016243ATP-dependent RNA helicase dbp6. (901 aa)
FOC1_g10016280Zinc finger HIT domain-containing protein 3. (234 aa)
FOC1_g10015399SDO1-like protein C21C3.19. (113 aa)
FOC1_g1001540440S ribosomal protein S28. (68 aa)
FOC1_g10015500Ribosome biogenesis protein RPF2. (317 aa)
FOC1_g10014851Ribonucleases P/MRP protein subunit POP1. (906 aa)
FOC1_g10015956Nucleolar protein 12. (566 aa)
FOC1_g1001596340S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (152 aa)
FOC1_g10016025Polynucleotide 5'-hydroxyl-kinase GRC3. (617 aa)
FOC1_g10016254Uncharacterized protein. (243 aa)
FOC1_g10012666rRNA methyltransferase 1, mitochondrial. (689 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1066 aa)
FOC1_g1001644540S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
FOC1_g1001472660S ribosomal protein L8. (261 aa)
FOC1_g10012813U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (709 aa)
FOC1_g10012865U3 small nucleolar RNA-associated protein 15. (528 aa)
FOC1_g10012941U3 small nucleolar ribonucleoprotein IMP4. (298 aa)
FOC1_g1000673254S ribosomal protein L3, mitochondrial. (383 aa)
FOC1_g10009081BTB domain-containing protein. (293 aa)
FOC1_g10009254Uncharacterized protein. (1026 aa)
FOC1_g10012788Uncharacterized protein. (357 aa)
FOC1_g1001283960S ribosomal protein L5. (302 aa)
FOC1_g10002011Uncharacterized protein. (365 aa)
FOC1_g10008091WD repeat-containing protein JIP5. (404 aa)
FOC1_g10009107Putative methyltransferase BUD23. (280 aa)
FOC1_g10013603U3 small nucleolar RNA-associated protein 10. (720 aa)
FOC1_g10013638Peptidyl-prolyl cis-trans isomerase. (135 aa)
FOC1_g10013724Putative U3 small nucleolar RNA-associated protein 13. (908 aa)
FOC1_g10013841Ribosome maturation protein sdo1. (308 aa)
rpl10aRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
FOC1_g10001315Uncharacterized protein. (189 aa)
FOC1_g10013475RIX1 domain-containing protein. (740 aa)
FOC1_g10015488Nuclear GTP-binding protein NUG1. (544 aa)
FOC1_g10013599Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4697 aa)
FOC1_g10013639Uncharacterized protein. (378 aa)
FOC1_g10015584GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)
FOC1_g1001566160S ribosomal protein L35. (125 aa)
FOC1_g10015687Nuclear localization sequence-binding protein. (503 aa)
FOC1_g10013730Uncharacterized protein. (504 aa)
FOC1_g100137355'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1415 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
FOC1_g10013919Uncharacterized protein. (594 aa)
FOC1_g10006871Exosome complex component rrp43. (333 aa)
FOC1_g10015903Putative WD repeat-containing protein C17D11.16. (540 aa)
FOC1_g1001401540S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
FOC1_g10006928[NU+] prion formation protein 1. (1079 aa)
FOC1_g10005139Ribosome biogenesis protein BMS1 like protein. (1110 aa)
FOC1_g10016166U3 small nucleolar RNA-associated protein 17. (962 aa)
FOC1_g10016511Pre-rRNA-processing protein IPI3. (374 aa)
FOC1_g1000688760S ribosomal protein L14-A. (147 aa)
FOC1_g10014970Mid2 domain-containing protein. (364 aa)
FOC1_g10015000U3 small nucleolar RNA-associated protein 14. (887 aa)
FOC1_g10015005Bifunctional protein RIB2. (167 aa)
FOC1_g10005109ATP-dependent RNA helicase DBP10. (897 aa)
FOC1_g10015010Pre-rRNA-processing protein TSR2. (206 aa)
FOC1_g10005228C2H2-type domain-containing protein. (548 aa)
FOC1_g10015511Exonuclease domain-containing protein. (717 aa)
FOC1_g10015541Ribosome biogenesis protein nsa2. (260 aa)
FOC1_g10015546UPF0661 TPR repeat-containing protein C16D10.01c. (355 aa)
FOC1_g10015577RNA 3'-terminal phosphate cyclase-like protein. (404 aa)
FOC1_g10015587Exosome complex component RRP46. (250 aa)
FOC1_g10008126Ribosome assembly protein 1. (1060 aa)
FOC1_g10008168Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
FOC1_g10015786DNA polymerase V. (933 aa)
FOC1_g10012884U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (719 aa)
FOC1_g10008301Uncharacterized protein. (903 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa)
FOC1_g10015916rRNA-processing protein utp23. (288 aa)
FOC1_g10015989CBF domain-containing protein. (549 aa)
FOC1_g10016124Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (99 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (763 aa)
FOC1_g10016255Uncharacterized protein. (367 aa)
FOC1_g10009157Ribosome assembly protein 4. (506 aa)
FOC1_g10010941H/ACA ribonucleoprotein complex subunit 2. (241 aa)
FOC1_g10016477Nucleolar complex protein 2. (777 aa)
FOC1_g10016504U3 small nucleolar RNA-associated protein 4. (879 aa)
FOC1_g10014767Ribosome biogenesis protein enp2 like protein. (651 aa)
FOC1_g10015573Protein PXR1. (362 aa)
FOC1_g1001479137S ribosomal protein S7, mitochondrial. (351 aa)
FOC1_g10015782U3 small nucleolar RNA-associated protein 20. (2605 aa)
FOC1_g10004260RNase III domain-containing protein. (109 aa)
FOC1_g10015867Putative U3 small nucleolar RNA-associated protein 18. (581 aa)
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (398 aa)
FOC1_g10014106U3 small nucleolar RNA-associated protein 22. (1105 aa)
FOC1_g10014217Ribonuclease 3. (345 aa)
FOC1_g10010977U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
FOC1_g1001625640S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (206 aa)
FOC1_g10014274Putative pre-mRNA-splicing factor ATP-dependent RNA helicase prp43. (415 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (659 aa)
FOC1_g10014333Nucleolar protein 16. (215 aa)
FOC1_g10012908Exosome complex component rrp4. (331 aa)
FOC1_g10013514Nucleolar pre-ribosomal-associated protein 2. (1361 aa)
FOC1_g10013523Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
FOC1_g1001447840S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
FOC1_g10013642ATP-dependent RNA helicase DBP8; Belongs to the DEAD box helicase family. (539 aa)
FOC1_g10013738Putative WD repeat-containing protein C2E1P5.05. (582 aa)
FOC1_g10003805Uncharacterized protein. (405 aa)
FOC1_g10002047ATP-dependent RNA helicase DBP9. (614 aa)
FOC1_g1001376360S acidic ribosomal protein P0. (382 aa)
FOC1_g10010122Uncharacterized protein. (655 aa)
FOC1_g10014854Exosome complex component RRP40. (245 aa)
FOC1_g1001391660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
FOC1_g10014192RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (473 aa)
FOC1_g10014003Nucleolar protein 9. (759 aa)
FOC1_g10014269Box C/D snoRNA protein 1. (428 aa)
FOC1_g10015107Protein roadkill. (280 aa)
FOC1_g10000246Ribosomal RNA-processing protein 7. (313 aa)
FOC1_g10014424U3 small nucleolar RNA-associated protein 6. (395 aa)
FOC1_g10014449Exosome complex exonuclease rrp6. (766 aa)
FOC1_g10011701U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (270 aa)
FOC1_g10001319Uncharacterized protein. (146 aa)
FOC1_g10014674ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family. (361 aa)
FOC1_g10012790Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
FOC1_g1001299454S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family. (296 aa)
FOC1_g10013005Ribosomal RNA methyltransferase MRM2, mitochondrial. (301 aa)
FOC1_g10009500ATP-dependent RNA helicase DRS1; Belongs to the DEAD box helicase family. (683 aa)
FOC1_g10002038Uncharacterized protein. (237 aa)
FOC1_g10006624rRNA 2'-O-methyltransferase fibrillarin. (319 aa)
FOC1_g10006725Uncharacterized protein. (1079 aa)
FOC1_g10013640Multisubstrate pseudouridine synthase 7. (741 aa)
FOC1_g10013655Uncharacterized protein. (263 aa)
FOC1_g10002656Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (534 aa)
FOC1_g10013686Putative helicase mot1. (1895 aa)
FOC1_g10013711Putative methyltransferase C2C4.06c; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (601 aa)
FOC1_g10002720Translation machinery-associated protein 64. (621 aa)
FOC1_g10009294BTB domain-containing protein. (306 aa)
FOC1_g10012468RNA helicase. (795 aa)
FOC1_g10013920ATP-dependent RNA helicase mrh-4, mitochondrial. (534 aa)
FOC1_g10013930rRNA-processing protein efg-1. (303 aa)
FOC1_g1000944940S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
FOC1_g10008404RRM domain-containing protein. (319 aa)
FOC1_g10012469Pre-rRNA-processing protein esf1. (691 aa)
FOC1_g10013542Ribosome biogenesis protein RLP24. (212 aa)
FOC1_g10006817BUD22 family protein C4F10.06. (466 aa)
FOC1_g10006822Protein BFR2. (513 aa)
FOC1_g10005002Uncharacterized protein. (628 aa)
FOC1_g1001372760S ribosomal subunit assembly/export protein loc-1. (195 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (448 aa)
FOC1_g10002764rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (594 aa)
FOC1_g10002800Nucleolar protein 56. (511 aa)
FOC1_g10013942Putative nucleolar complex protein 14. (854 aa)
FOC1_g10008415Uncharacterized protein. (185 aa)
FOC1_g10014007Mitochondrial acidic protein MAM33. (290 aa)
FOC1_g10003105Histidine protein methyltransferase 1. (358 aa)
FOC1_g10003130Ribosome biogenesis protein MAK21. (938 aa)
FOC1_g10006101RNA exonuclease 3. (330 aa)
FOC1_g10008117rRNA biogenesis protein rrp5. (1760 aa)
FOC1_g10008148Uncharacterized protein. (459 aa)
FOC1_g10005901Ribosome assembly protein 3. (76 aa)
FOC1_g10008262Ribosome assembly protein rrb1. (487 aa)
FOC1_g10005911Zinc finger protein bud20. (119 aa)
FOC1_g10005823ABC transporter ATP-binding protein ARB1. (618 aa)
FOC1_g10002264Kelch repeat and BTB domain-containing protein 1. (287 aa)
FOC1_g10006847Pre-rRNA-processing protein IPI1. (342 aa)
FOC1_g10003116Pre-rRNA-processing protein PNO1. (250 aa)
FOC1_g10013210Ribosomal RNA-processing protein 12. (1225 aa)
FOC1_g10005127Serine/threonine-protein kinase rio2. (408 aa)
FOC1_g1000521040S ribosomal protein S27. (82 aa)
FOC1_g10014090HAD_SAK_1 domain-containing protein. (573 aa)
FOC1_g10014100Ribosomal RNA-processing protein 14. (549 aa)
FOC1_g10014210Putative ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (679 aa)
FOC1_g10009744Nucleolar protein 58. (593 aa)
FOC1_g10014391Putative ATP-dependent RNA helicase DHR1. (1212 aa)
FOC1_g10008594Putative eukaryotic translation initiation factor 5. (423 aa)
FOC1_g1000815040S ribosomal protein S19. (150 aa)
FOC1_g10008664Nucleoporin nup82. (851 aa)
FOC1_g10008679Protein kri1. (657 aa)
FOC1_g10014535rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (343 aa)
FOC1_g10014555Ankyrin repeat-containing protein YAR1. (187 aa)
FOC1_g10008734Sas10 domain-containing protein. (616 aa)
FOC1_g1001328837S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family. (91 aa)
FOC1_g10008268Uncharacterized protein. (350 aa)
FOC1_g100095275'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (988 aa)
FOC1_g10009576Putative pre-mRNA-splicing factor ATP-dependent RNA helicase prp43. (767 aa)
FOC1_g10010938RNA exonuclease 3. (650 aa)
FOC1_g10010249H/ACA ribonucleoprotein complex non-core subunit NAF1. (560 aa)
FOC1_g10010263Uncharacterized protein. (485 aa)
FOC1_g1001100360S ribosomal protein L30. (110 aa)
FOC1_g10010294KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (320 aa)
FOC1_g10009715Ribosome biogenesis ATPase RIX7. (738 aa)
FOC1_g10010338Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
FOC1_g10009730Exportin-1. (1079 aa)
FOC1_g10008635Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (665 aa)
FOC1_g10008740DUF2431 domain-containing protein. (342 aa)
FOC1_g10002267Uncharacterized protein. (447 aa)
FOC1_g10011228Putative WD repeat-containing protein C25H1.08c. (486 aa)
FOC1_g10014031Ribosomal RNA small subunit methyltransferase NEP1. (259 aa)
FOC1_g10007223Putative U3 small nucleolar RNA-associated protein 7. (552 aa)
FOC1_g10014173U4/U6.U5 tri-snRNP-associated protein snu66. (644 aa)
FOC1_g10014178Uncharacterized protein. (717 aa)
FOC1_g10014255Protein MAK16; Belongs to the MAK16 family. (312 aa)
FOC1_g10009350Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (543 aa)
FOC1_g10011061ATP-dependent RNA helicase MAK5; Belongs to the DEAD box helicase family. (756 aa)
FOC1_g10014380Ribosomal RNA-processing protein 15. (300 aa)
FOC1_g10010773Uncharacterized protein. (545 aa)
FOC1_g10009967ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family. (586 aa)
FOC1_g1001005825S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (291 aa)
FOC1_g10007224Ribosome biogenesis protein tsr1 like protein. (787 aa)
FOC1_g1001100460S ribosomal protein L10-A. (221 aa)
FOC1_g10010104ATP-dependent RNA helicase DBP7; Belongs to the DEAD box helicase family. (739 aa)
FOC1_g10010109Pre-rRNA-processing protein ESF2. (322 aa)
FOC1_g10012245H/ACA ribonucleoprotein complex subunit 3. (66 aa)
FOC1_g10010188Uncharacterized protein. (362 aa)
FOC1_g10001864Uncharacterized protein. (122 aa)
FOC1_g10005286Uncharacterized protein. (357 aa)
FOC1_g10010287ATPase family protein 2 protein. (753 aa)
FOC1_g10005369Uncharacterized protein. (731 aa)
FOC1_g10004747C2H2-type domain-containing protein. (322 aa)
FOC1_g10010371ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (485 aa)
FOC1_g10002263BTB domain-containing protein. (239 aa)
FOC1_g10002273zf-C2H2_2 domain-containing protein. (331 aa)
FOC1_g10010004rRNA-processing protein fcf2. (198 aa)
FOC1_g1001538860S ribosomal protein L33-A. (109 aa)
FOC1_g10014027DnaJ like protein subfamily C member 21. (528 aa)
FOC1_g10010054Ribonuclease MRP protein subunit rmp1. (267 aa)
FOC1_g10014042Suppressor of glycerol defect protein 1. (750 aa)
FOC1_g10010658Exosome complex component mtr3. (283 aa)
FOC1_g10014073H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (210 aa)
FOC1_g10011866Exosome complex component SKI6. (268 aa)
FOC1_g10014134Putative 20S rRNA accumulation protein 4. (401 aa)
FOC1_g10010382Ribosomal RNA-processing protein 1 like protein. (239 aa)
FOC1_g10008499U6 snRNA-associated Sm-like protein LSm7. (133 aa)
FOC1_g1001051560S ribosomal protein L34-B. (116 aa)
FOC1_g10010632RNA exonuclease 4. (319 aa)
FOC1_g10002515J domain-containing protein. (444 aa)
FOC1_g10010342Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (493 aa)
FOC1_g10012430Putative ribosome biogenesis protein C8F11.04. (377 aa)
FOC1_g10012583Protein MAK11. (477 aa)
FOC1_g10012136Ribonucleases P/MRP protein subunit POP7. (168 aa)
FOC1_g10008396Protein cms1. (254 aa)
FOC1_g10008422Putative pre-mRNA-splicing factor ATP-dependent RNA helicase prp43. (298 aa)
FOC1_g10013254Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (740 aa)
FOC1_g1001224420S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (446 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
FOC1_g1000860340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (260 aa)
FOC1_g10008633Uncharacterized protein. (239 aa)
FOC1_g10006558zf-C2H2_2 domain-containing protein. (323 aa)
FOC1_g10013095Protein sof1. (445 aa)
FOC1_g10001429Protein roadkill. (239 aa)
FOC1_g10007202U3 small nucleolar RNA-associated protein 5. (391 aa)
FOC1_g1000967660S ribosomal protein L26-1. (136 aa)
FOC1_g10007287RNA helicase. (587 aa)
FOC1_g10007318F-box domain-containing protein. (431 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (293 aa)
FOC1_g10003103Putative ATP-dependent RNA helicase prh1. (779 aa)
FOC1_g10008636Ribosome production factor 1. (415 aa)
FOC1_g1000867140S ribosomal protein S20. (116 aa)
FOC1_g1001001240S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
FOC1_g10010042Putative RNA-binding protein C4F6.14. (446 aa)
FOC1_g10003218RNA exonuclease 3. (369 aa)
FOC1_g10013026Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (607 aa)
FOC1_g10011103Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (177 aa)
FOC1_g10010370Brix domain-containing protein C1B9.03c. (418 aa)
FOC1_g10013157Putative ribonuclease P protein subunit 3. (297 aa)
FOC1_g10010431Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (204 aa)
FOC1_g10010549Uncharacterized protein. (1256 aa)
FOC1_g10010554Ribonuclease P protein subunit. (228 aa)
FOC1_g10013323Putative helicase C6F12.16c. (1094 aa)
FOC1_g10009529Ribosomal protein arginine N-methytransferase rmt3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (475 aa)
FOC1_g10002938Uncharacterized protein. (118 aa)
FOC1_g10009712Exosome complex component RRP42. (338 aa)
FOC1_g10009732RNA helicase. (635 aa)
FOC1_g10008687Exosome complex component rrp45. (293 aa)
FOC1_g1001006060S ribosomal protein L25. (153 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
FOC1_g10010567U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (465 aa)
FOC1_g10007236RRM domain-containing protein. (369 aa)
FOC1_g10007317Ribosome biogenesis protein BRX1. (307 aa)
FOC1_g1001001160S ribosomal protein L7. (248 aa)
FOC1_g10010041Nucleolar protein 4. (261 aa)
FOC1_g10003573Uncharacterized protein. (133 aa)
FOC1_g10010497ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (563 aa)
FOC1_g1001050240S ribosomal protein S16. (133 aa)
FOC1_g10015549Pumilio like proteiny domain family member 6. (683 aa)
FOC1_g1001566760S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
FOC1_g10015804mRNA export factor MEX67. (658 aa)
FOC1_g10015894U6 snRNA-associated Sm-like protein LSm6. (83 aa)
FOC1_g10015972Oligoribonuclease, mitochondrial. (214 aa)
Your Current Organism:
Fusarium oxysporum f. sp. cubense race 1
NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1
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