58 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10010011	60S ribosomal protein L7. (248 aa)
	FOC1_g10015388	60S ribosomal protein L33-A. (109 aa)
	FOC1_g10015549	Pumilio like proteiny domain family member 6. (683 aa)
	FOC1_g10015667	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
	FOC1_g10016280	Zinc finger HIT domain-containing protein 3. (234 aa)
	FOC1_g10015500	Ribosome biogenesis protein RPF2. (317 aa)
	FOC1_g10014726	60S ribosomal protein L8. (261 aa)
	FOC1_g10012839	60S ribosomal protein L5. (302 aa)
	FOC1_g10008091	WD repeat-containing protein JIP5. (404 aa)
	rpl10a	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	FOC1_g10015488	Nuclear GTP-binding protein NUG1. (544 aa)
	FOC1_g10013599	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4697 aa)
	FOC1_g10015661	60S ribosomal protein L35. (125 aa)
	FOC1_g10006887	60S ribosomal protein L14-A. (147 aa)
	FOC1_g10015541	Ribosome biogenesis protein nsa2. (260 aa)
	FOC1_g10008168	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (763 aa)
	FOC1_g10009157	Ribosome assembly protein 4. (506 aa)
	FOC1_g10010941	H/ACA ribonucleoprotein complex subunit 2. (241 aa)
	FOC1_g10016477	Nucleolar complex protein 2. (777 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (659 aa)
	FOC1_g10014333	Nucleolar protein 16. (215 aa)
	FOC1_g10013523	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
	FOC1_g10013763	60S acidic ribosomal protein P0. (382 aa)
	FOC1_g10010122	Uncharacterized protein. (655 aa)
	FOC1_g10013916	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	FOC1_g10014269	Box C/D snoRNA protein 1. (428 aa)
	FOC1_g10006725	Uncharacterized protein. (1079 aa)
	FOC1_g10013542	Ribosome biogenesis protein RLP24. (212 aa)
	FOC1_g10013727	60S ribosomal subunit assembly/export protein loc-1. (195 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (448 aa)
	FOC1_g10003105	Histidine protein methyltransferase 1. (358 aa)
	FOC1_g10008117	rRNA biogenesis protein rrp5. (1760 aa)
	FOC1_g10005901	Ribosome assembly protein 3. (76 aa)
	FOC1_g10014100	Ribosomal RNA-processing protein 14. (549 aa)
	FOC1_g10014210	Putative ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (679 aa)
	FOC1_g10009715	Ribosome biogenesis ATPase RIX7. (738 aa)
	FOC1_g10010338	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (659 aa)
	FOC1_g10011228	Putative WD repeat-containing protein C25H1.08c. (486 aa)
	FOC1_g10014255	Protein MAK16; Belongs to the MAK16 family. (312 aa)
	FOC1_g10014380	Ribosomal RNA-processing protein 15. (300 aa)
	FOC1_g10011004	60S ribosomal protein L10-A. (221 aa)
	FOC1_g10010287	ATPase family protein 2 protein. (753 aa)
	FOC1_g10004747	C2H2-type domain-containing protein. (322 aa)
	FOC1_g10014027	DnaJ like protein subfamily C member 21. (528 aa)
	FOC1_g10012430	Putative ribosome biogenesis protein C8F11.04. (377 aa)
	FOC1_g10013254	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (740 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
	FOC1_g10009676	60S ribosomal protein L26-1. (136 aa)
	FOC1_g10007318	F-box domain-containing protein. (431 aa)
	FOC1_g10008636	Ribosome production factor 1. (415 aa)
	FOC1_g10010041	Nucleolar protein 4. (261 aa)
	FOC1_g10010042	Putative RNA-binding protein C4F6.14. (446 aa)
	FOC1_g10010370	Brix domain-containing protein C1B9.03c. (418 aa)
	FOC1_g10002938	Uncharacterized protein. (118 aa)
	FOC1_g10010060	60S ribosomal protein L25. (153 aa)
	FOC1_g10007236	RRM domain-containing protein. (369 aa)
	FOC1_g10007317	Ribosome biogenesis protein BRX1. (307 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	FOC1_g10002938	N4TUN5	N4UVS5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.692
ERB1	FOC1_g10004747	N4TUN5	N4UGQ8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	C2H2-type domain-containing protein.	0.441
ERB1	FOC1_g10006725	N4TUN5	N4U2X6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.805
ERB1	FOC1_g10006887	N4TUN5	N4TRT0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L14-A.	0.960
ERB1	FOC1_g10007236	N4TUN5	N4UZ89	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RRM domain-containing protein.	0.982
ERB1	FOC1_g10007317	N4TUN5	N4UZF4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein BRX1.	0.984
ERB1	FOC1_g10007318	N4TUN5	N4US87	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	F-box domain-containing protein.	0.984
ERB1	FOC1_g10008091	N4TUN5	N4TKA6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD repeat-containing protein JIP5.	0.610
ERB1	FOC1_g10008117	N4TUN5	N4U828	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA biogenesis protein rrp5.	0.947
ERB1	FOC1_g10008168	N4TUN5	N4TTK0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.748
ERB1	FOC1_g10008636	N4TUN5	N4USS2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome production factor 1.	0.980
ERB1	FOC1_g10009157	N4TUN5	N4TVG3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome assembly protein 4.	0.928
ERB1	FOC1_g10009676	N4TUN5	N4US29	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L26-1.	0.953
ERB1	FOC1_g10009715	N4TUN5	N4UCN4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis ATPase RIX7.	0.887
ERB1	FOC1_g10010011	N4TUN5	N4V0L0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L7.	0.996
ERB1	FOC1_g10010041	N4TUN5	N4V0N0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar protein 4.	0.912
ERB1	FOC1_g10010042	N4TUN5	N4UTI7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Putative RNA-binding protein C4F6.14.	0.894
ERB1	FOC1_g10010060	N4TUN5	N4UWV0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L25.	0.964
ERB1	FOC1_g10010122	N4TUN5	N4TZA9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.614
ERB1	FOC1_g10010287	N4TUN5	N4UGH9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	ATPase family protein 2 protein.	0.436