84 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10005978	Uncharacterized protein. (456 aa)
	FOC1_g10007317	Ribosome biogenesis protein BRX1. (307 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
	FOC1_g10010060	60S ribosomal protein L25. (153 aa)
	FOC1_g10002938	Uncharacterized protein. (118 aa)
	FOC1_g10010370	Brix domain-containing protein C1B9.03c. (418 aa)
	FOC1_g10010012	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	FOC1_g10008701	Uncharacterized protein. (710 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (293 aa)
	FOC1_g10007318	F-box domain-containing protein. (431 aa)
	FOC1_g10009681	Protein sum2. (547 aa)
	FOC1_g10009652	CBFD_NFYB_HMF domain-containing protein. (113 aa)
	FOC1_g10008407	CENP-T_C domain-containing protein. (530 aa)
	TIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
	FOC1_g10007773	Uncharacterized protein. (385 aa)
	FOC1_g10010194	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1149 aa)
	FOC1_g10010029	Kinetochore-associated protein MTW1. (343 aa)
	FOC1_g10011747	Uncharacterized protein. (307 aa)
	FOC1_g10010346	Spindle pole body component. (923 aa)
	FOC1_g10003193	Putative transcriptional regulatory protein PB24D3.01. (667 aa)
	FOC1_g10011004	60S ribosomal protein L10-A. (221 aa)
	FOC1_g10010865	Uncharacterized protein. (432 aa)
	FOC1_g10009499	Microtubule integrity protein mal3. (230 aa)
	FOC1_g10011279	Non-specific serine/threonine protein kinase. (843 aa)
	FOC1_g10011228	Putative WD repeat-containing protein C25H1.08c. (486 aa)
	FOC1_g10008584	Nucleolysin TIAR. (479 aa)
	FOC1_g10009651	Uncharacterized protein. (420 aa)
	FOC1_g10010190	DNA topoisomerase 2-associated protein pat1. (814 aa)
	FOC1_g10013298	Uncharacterized protein. (1564 aa)
	FOC1_g10013288	37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family. (91 aa)
	FOC1_g10008150	40S ribosomal protein S19. (150 aa)
	FOC1_g10014462	Septin like protein spn2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (338 aa)
	FOC1_g10008594	Putative eukaryotic translation initiation factor 5. (423 aa)
	FOC1_g10005210	40S ribosomal protein S27. (82 aa)
	FOC1_g10005863	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (817 aa)
	FOC1_g10005901	Ribosome assembly protein 3. (76 aa)
	FOC1_g10008148	Uncharacterized protein. (459 aa)
	FOC1_g10008117	rRNA biogenesis protein rrp5. (1760 aa)
	FOC1_g10010693	CBL-interacting serine/threonine-protein kinase 21. (350 aa)
	FOC1_g10003105	Histidine protein methyltransferase 1. (358 aa)
	FOC1_g10014007	Mitochondrial acidic protein MAM33. (290 aa)
	FOC1_g10005861	Uncharacterized protein. (266 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	FOC1_g10009481	FIT family protein scs3. (188 aa)
	FOC1_g10012519	Spindle pole body component. (783 aa)
	FOC1_g10000247	Uncharacterized protein. (694 aa)
	FOC1_g10002038	Uncharacterized protein. (237 aa)
	FOC1_g10012994	54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family. (296 aa)
	FOC1_g10000246	Ribosomal RNA-processing protein 7. (313 aa)
	FOC1_g10014280	Kinetochore protein mis15. (505 aa)
	FOC1_g10013916	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	FOC1_g10013911	Non-specific serine/threonine protein kinase. (858 aa)
	FOC1_g10014081	Spindle pole body protein pcp1. (1206 aa)
	FOC1_g10013763	60S acidic ribosomal protein P0. (382 aa)
	FOC1_g10014478	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (213 aa)
	FOC1_g10013523	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (244 aa)
	FOC1_g10014070	Phospholipid:diacylglycerol acyltransferase. (638 aa)
	FOC1_g10014791	37S ribosomal protein S7, mitochondrial. (351 aa)
	FOC1_g10016426	Uncharacterized protein. (387 aa)
	FOC1_g10009157	Ribosome assembly protein 4. (506 aa)
	FOC1_g10016094	Centromere protein 3. (628 aa)
	FOC1_g10008168	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
	FOC1_g10008126	Ribosome assembly protein 1. (1060 aa)
	FOC1_g10008111	Anaphase spindle elongation protein 1. (746 aa)
	FOC1_g10012714	Uncharacterized protein. (707 aa)
	FOC1_g10015395	Cell cycle serine/threonine-protein kinase CDC5/MSD2. (933 aa)
	FOC1_g10014729	Seipin like protein. (416 aa)
	FOC1_g10016268	LsmAD domain-containing protein. (916 aa)
	FOC1_g10013847	WD repeat-containing protein WRAP73. (511 aa)
	FOC1_g10013599	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4697 aa)
	FOC1_g10013841	Ribosome maturation protein sdo1. (308 aa)
	FOC1_g10012839	60S ribosomal protein L5. (302 aa)
	FOC1_g10012961	Spindle pole body component. (856 aa)
	FOC1_g10012782	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (462 aa)
	FOC1_g10016425	26S proteasome regulatory subunit rpn11. (337 aa)
	FOC1_g10015963	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (152 aa)
	FOC1_g10014700	Uncharacterized protein. (283 aa)
	FOC1_g10015500	Ribosome biogenesis protein RPF2. (317 aa)
	FOC1_g10016330	Kinesin-like protein bimC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1163 aa)
	FOC1_g10015404	40S ribosomal protein S28. (68 aa)
	FOC1_g10016157	Multiple RNA-binding domain-containing protein 1. (852 aa)
	FOC1_g10016087	ARS-binding protein 2. (618 aa)
	FOC1_g10015667	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (200 aa)
	FOC1_g10015539	Serine/threonine-protein kinase MPS1. (838 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10000246	FOC1_g10002038	N4U0E0	N4U2G3	Ribosomal RNA-processing protein 7.	Uncharacterized protein.	0.967
FOC1_g10000246	FOC1_g10002938	N4U0E0	N4UVS5	Ribosomal RNA-processing protein 7.	Uncharacterized protein.	0.590
FOC1_g10000246	FOC1_g10005210	N4U0E0	N4UA39	Ribosomal RNA-processing protein 7.	40S ribosomal protein S27.	0.959
FOC1_g10000246	FOC1_g10007317	N4U0E0	N4UZF4	Ribosomal RNA-processing protein 7.	Ribosome biogenesis protein BRX1.	0.737
FOC1_g10000246	FOC1_g10007318	N4U0E0	N4US87	Ribosomal RNA-processing protein 7.	F-box domain-containing protein.	0.737
FOC1_g10000246	FOC1_g10008117	N4U0E0	N4U828	Ribosomal RNA-processing protein 7.	rRNA biogenesis protein rrp5.	0.995
FOC1_g10000246	FOC1_g10008148	N4U0E0	N4U846	Ribosomal RNA-processing protein 7.	Uncharacterized protein.	0.896
FOC1_g10000246	FOC1_g10008150	N4U0E0	N4UBF8	Ribosomal RNA-processing protein 7.	40S ribosomal protein S19.	0.896
FOC1_g10000246	FOC1_g10008168	N4U0E0	N4TTK0	Ribosomal RNA-processing protein 7.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.590
FOC1_g10000246	FOC1_g10010012	N4U0E0	N4UTG4	Ribosomal RNA-processing protein 7.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.972
FOC1_g10000246	FOC1_g10010370	N4U0E0	N4UUM6	Ribosomal RNA-processing protein 7.	Brix domain-containing protein C1B9.03c.	0.765
FOC1_g10000246	FOC1_g10013523	N4U0E0	N4TYG6	Ribosomal RNA-processing protein 7.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.889
FOC1_g10000246	FOC1_g10013763	N4U0E0	N4TZ83	Ribosomal RNA-processing protein 7.	60S acidic ribosomal protein P0.	0.703
FOC1_g10000246	FOC1_g10013916	N4U0E0	N4TZN5	Ribosomal RNA-processing protein 7.	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.844
FOC1_g10000246	FOC1_g10014478	N4U0E0	N4TYM4	Ribosomal RNA-processing protein 7.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.966
FOC1_g10000246	FOC1_g10014791	N4U0E0	N4TW22	Ribosomal RNA-processing protein 7.	37S ribosomal protein S7, mitochondrial.	0.959
FOC1_g10000246	FOC1_g10015404	N4U0E0	N4TDU9	Ribosomal RNA-processing protein 7.	40S ribosomal protein S28.	0.956
FOC1_g10000246	FOC1_g10015500	N4U0E0	N4TE13	Ribosomal RNA-processing protein 7.	Ribosome biogenesis protein RPF2.	0.868
FOC1_g10000246	FOC1_g10016157	N4U0E0	N4TDH2	Ribosomal RNA-processing protein 7.	Multiple RNA-binding domain-containing protein 1.	0.592
FOC1_g10000247	FOC1_g10013847	N4U3R2	N4TPC4	Uncharacterized protein.	WD repeat-containing protein WRAP73.	0.477