8 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10010941	H/ACA ribonucleoprotein complex subunit 2. (241 aa)
	FOC1_g10012666	rRNA methyltransferase 1, mitochondrial. (689 aa)
	FOC1_g10014726	60S ribosomal protein L8. (261 aa)
	FOC1_g10008265	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (400 aa)
	FOC1_g10013637	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (146 aa)
	FOC1_g10013876	Eukaryotic peptide chain release factor subunit 1. (438 aa)
	FOC1_g10012790	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
	FOC1_g10011003	60S ribosomal protein L30. (110 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10008265	FOC1_g10010941	N4TRL9	N4TVJ6	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	H/ACA ribonucleoprotein complex subunit 2.	0.631
FOC1_g10008265	FOC1_g10011003	N4TRL9	N4UCJ7	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	60S ribosomal protein L30.	0.903
FOC1_g10008265	FOC1_g10012790	N4TRL9	N4U1A0	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.617
FOC1_g10008265	FOC1_g10013637	N4TRL9	N4TYT7	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.888
FOC1_g10008265	FOC1_g10013876	N4TRL9	N4TZK5	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	Eukaryotic peptide chain release factor subunit 1.	0.491
FOC1_g10008265	FOC1_g10014726	N4TRL9	N4TGU5	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	60S ribosomal protein L8.	0.917
FOC1_g10010941	FOC1_g10008265	N4TVJ6	N4TRL9	H/ACA ribonucleoprotein complex subunit 2.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.631
FOC1_g10010941	FOC1_g10011003	N4TVJ6	N4UCJ7	H/ACA ribonucleoprotein complex subunit 2.	60S ribosomal protein L30.	0.980
FOC1_g10010941	FOC1_g10012790	N4TVJ6	N4U1A0	H/ACA ribonucleoprotein complex subunit 2.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.946
FOC1_g10010941	FOC1_g10013876	N4TVJ6	N4TZK5	H/ACA ribonucleoprotein complex subunit 2.	Eukaryotic peptide chain release factor subunit 1.	0.691
FOC1_g10011003	FOC1_g10008265	N4UCJ7	N4TRL9	60S ribosomal protein L30.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.903
FOC1_g10011003	FOC1_g10010941	N4UCJ7	N4TVJ6	60S ribosomal protein L30.	H/ACA ribonucleoprotein complex subunit 2.	0.980
FOC1_g10011003	FOC1_g10012790	N4UCJ7	N4U1A0	60S ribosomal protein L30.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.977
FOC1_g10011003	FOC1_g10013637	N4UCJ7	N4TYT7	60S ribosomal protein L30.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.995
FOC1_g10011003	FOC1_g10013876	N4UCJ7	N4TZK5	60S ribosomal protein L30.	Eukaryotic peptide chain release factor subunit 1.	0.763
FOC1_g10011003	FOC1_g10014726	N4UCJ7	N4TGU5	60S ribosomal protein L30.	60S ribosomal protein L8.	0.999
FOC1_g10012790	FOC1_g10008265	N4U1A0	N4TRL9	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.617
FOC1_g10012790	FOC1_g10010941	N4U1A0	N4TVJ6	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	H/ACA ribonucleoprotein complex subunit 2.	0.946
FOC1_g10012790	FOC1_g10011003	N4U1A0	N4UCJ7	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	60S ribosomal protein L30.	0.977
FOC1_g10012790	FOC1_g10013637	N4U1A0	N4TYT7	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.906