31 items (Fusarium oxysporum f. sp. cubense race 1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC1_g10013214	BZIP domain-containing protein. (570 aa)
	FOC1_g10016162	Uncharacterized protein. (331 aa)
	FOC1_g10012926	Uncharacterized protein. (989 aa)
	FOC1_g10009117	Uncharacterized protein. (1061 aa)
	FOC1_g10009118	Uncharacterized protein. (468 aa)
	FOC1_g10015416	Putative WD repeat-containing protein C2A9.03. (804 aa)
	FOC1_g10005840	Alpha-N-arabinofuranosidase 2; Belongs to the glycosyl hydrolase 43 family. (336 aa)
	FOC1_g10015798	Uncharacterized protein. (523 aa)
	FOC1_g10000916	Meiotically up-regulated protein 86 protein. (230 aa)
	FOC1_g10016289	Zinc finger protein SFP1. (741 aa)
	FOC1_g10007479	Uncharacterized protein. (1447 aa)
	FOC1_g10004619	Uncharacterized protein. (1038 aa)
	FOC1_g10010770	Uncharacterized protein. (1542 aa)
	FOC1_g10007513	Uncharacterized protein. (788 aa)
	FOC1_g10012856	Uncharacterized protein. (352 aa)
	FOC1_g10009068	Uncharacterized protein. (774 aa)
	FOC1_g10007478	Uncharacterized protein. (88 aa)
	FOC1_g10004618	Uncharacterized protein. (1526 aa)
	FOC1_g10007821	Protein alcS. (276 aa)
	FOC1_g10008237	Acyl_transf_3 domain-containing protein. (501 aa)
	FOC1_g10007745	Alpha-N-arabinofuranosidase 2; Belongs to the glycosyl hydrolase 43 family. (325 aa)
	FOC1_g10014412	Ammonia transport outward protein 2. (272 aa)
	FOC1_g10008644	Prolyl 4-hydroxylase subunit alpha-1. (274 aa)
	FOC1_g10008645	Lactose regulatory protein LAC9. (795 aa)
	FOC1_g10012075	Ammonia transport outward protein 2. (281 aa)
	FOC1_g10001364	Ammonia transport outward protein 2. (254 aa)
	FOC1_g10003310	Protein alcS. (278 aa)
	FOC1_g10013234	Protein alcS. (289 aa)
	FOC1_g10009595	Cell wall protein SED1. (210 aa)
	FOC1_g10003324	Uncharacterized protein. (361 aa)
	FOC1_g10009800	Meiotically up-regulated protein 86 protein. (220 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 1

NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC1_g10003324	FOC1_g10009595	N4UPZ6	N4UNF4	Uncharacterized protein.	Cell wall protein SED1.	0.583
FOC1_g10003324	FOC1_g10012856	N4UPZ6	N4TY70	Uncharacterized protein.	Uncharacterized protein.	0.583
FOC1_g10003324	FOC1_g10012926	N4UPZ6	N4TH20	Uncharacterized protein.	Uncharacterized protein.	0.583
FOC1_g10003324	FOC1_g10013214	N4UPZ6	N4UML1	Uncharacterized protein.	BZIP domain-containing protein.	0.583
FOC1_g10003324	FOC1_g10015798	N4UPZ6	N4TP91	Uncharacterized protein.	Uncharacterized protein.	0.583
FOC1_g10003324	FOC1_g10016162	N4UPZ6	N4TDH7	Uncharacterized protein.	Uncharacterized protein.	0.583
FOC1_g10008644	FOC1_g10008645	N4UBF3	N4UD75	Prolyl 4-hydroxylase subunit alpha-1.	Lactose regulatory protein LAC9.	0.428
FOC1_g10008644	FOC1_g10009595	N4UBF3	N4UNF4	Prolyl 4-hydroxylase subunit alpha-1.	Cell wall protein SED1.	0.405
FOC1_g10008644	FOC1_g10012856	N4UBF3	N4TY70	Prolyl 4-hydroxylase subunit alpha-1.	Uncharacterized protein.	0.405
FOC1_g10008644	FOC1_g10012926	N4UBF3	N4TH20	Prolyl 4-hydroxylase subunit alpha-1.	Uncharacterized protein.	0.405
FOC1_g10008644	FOC1_g10013214	N4UBF3	N4UML1	Prolyl 4-hydroxylase subunit alpha-1.	BZIP domain-containing protein.	0.405
FOC1_g10008644	FOC1_g10015798	N4UBF3	N4TP91	Prolyl 4-hydroxylase subunit alpha-1.	Uncharacterized protein.	0.405
FOC1_g10008644	FOC1_g10016162	N4UBF3	N4TDH7	Prolyl 4-hydroxylase subunit alpha-1.	Uncharacterized protein.	0.405
FOC1_g10008645	FOC1_g10008644	N4UD75	N4UBF3	Lactose regulatory protein LAC9.	Prolyl 4-hydroxylase subunit alpha-1.	0.428
FOC1_g10009117	FOC1_g10009118	N4TIG3	N4TKP2	Uncharacterized protein.	Uncharacterized protein.	0.547
FOC1_g10009118	FOC1_g10009117	N4TKP2	N4TIG3	Uncharacterized protein.	Uncharacterized protein.	0.547
FOC1_g10009595	FOC1_g10003324	N4UNF4	N4UPZ6	Cell wall protein SED1.	Uncharacterized protein.	0.583
FOC1_g10009595	FOC1_g10008644	N4UNF4	N4UBF3	Cell wall protein SED1.	Prolyl 4-hydroxylase subunit alpha-1.	0.405
FOC1_g10009595	FOC1_g10015416	N4UNF4	N4TNA7	Cell wall protein SED1.	Putative WD repeat-containing protein C2A9.03.	0.583
FOC1_g10012856	FOC1_g10003324	N4TY70	N4UPZ6	Uncharacterized protein.	Uncharacterized protein.	0.583