STRINGSTRING
tef1a tef1a FOC1_g10006710 FOC1_g10006710 FOC1_g10008305 FOC1_g10008305 FOC1_g10008126 FOC1_g10008126 FOC1_g10011944 FOC1_g10011944 FOC1_g10011196 FOC1_g10011196 MEF1 MEF1 FOC1_g10013778 FOC1_g10013778
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (460 aa)
FOC1_g10006710Eukaryotic translation initiation factor 5B. (1054 aa)
FOC1_g10008305GTP-binding protein 1. (632 aa)
FOC1_g10008126Ribosome assembly protein 1. (1060 aa)
FOC1_g10011944Tr-type G domain-containing protein. (983 aa)
FOC1_g10011196Elongation factor 2. (910 aa)
MEF1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (789 aa)
FOC1_g10013778Eukaryotic translation initiation factor 2 subunit gamma. (509 aa)
Your Current Organism:
Fusarium oxysporum f. sp. cubense race 1
NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1
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