(18 nodes) Nuclear periphery network (Fusarium oxysporum f. sp. cubense race 4)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC4_g10010469	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (417 aa)
	FOC4_g10000908	Cofilin; Belongs to the actin-binding proteins ADF family. (132 aa)
	FOC4_g10008739	Anaphase-promoting complex subunit 4. (762 aa)
	FOC4_g10011153	Importin alpha re-exporter. (959 aa)
	FOC4_g10006982	WD_REPEATS_REGION domain-containing protein. (511 aa)
	FOC4_g10012489	NTF2 domain-containing protein. (169 aa)
	FOC4_g10012929	Cofilin; Belongs to the actin-binding proteins ADF family. (153 aa)
	FOC4_g10003531	Putative di-and tripeptidase DUG2. (1610 aa)
	FOC4_g10010936	rRNA-processing protein EBP2. (418 aa)
	FOC4_g10011128	GAR domain-containing protein. (961 aa)
	FOC4_g10008249	Polyphosphoinositide phosphatase. (903 aa)
	FOC4_g10014317	Uncharacterized protein. (387 aa)
	FOC4_g10007098	Pre-mRNA-processing factor 17. (529 aa)
	FOC4_g10010470	Proteasome subunit alpha type. (269 aa)
	FOC4_g10013590	Target of rapamycin complex subunit LST8. (317 aa)
	FOC4_g10013544	Poly(A)+ RNA export protein. (358 aa)
	FOC4_g10011631	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (860 aa)
	FOC4_g10014318	26S proteasome regulatory subunit rpn11. (337 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 4

NCBI taxonomy Id: 1229665
Other names: F. oxysporum f. sp. cubense race 4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC4_g10006982	FOC4_g10014317	N1RR18	N1RGJ2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.744
FOC4_g10006982	FOC4_g10014318	N1RR18	N1R8E5	WD_REPEATS_REGION domain-containing protein.	26S proteasome regulatory subunit rpn11.	0.744
FOC4_g10008739	FOC4_g10014317	N1RUI3	N1RGJ2	Anaphase-promoting complex subunit 4.	Uncharacterized protein.	0.656
FOC4_g10008739	FOC4_g10014318	N1RUI3	N1R8E5	Anaphase-promoting complex subunit 4.	26S proteasome regulatory subunit rpn11.	0.656
FOC4_g10010469	FOC4_g10011631	N1RBX7	N1R8T3	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.987
FOC4_g10010469	FOC4_g10014317	N1RBX7	N1RGJ2	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	Uncharacterized protein.	0.981
FOC4_g10010469	FOC4_g10014318	N1RBX7	N1R8E5	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	26S proteasome regulatory subunit rpn11.	0.987
FOC4_g10010470	FOC4_g10011631	N1RE58	N1R8T3	Proteasome subunit alpha type.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.987
FOC4_g10010470	FOC4_g10014317	N1RE58	N1RGJ2	Proteasome subunit alpha type.	Uncharacterized protein.	0.981
FOC4_g10010470	FOC4_g10014318	N1RE58	N1R8E5	Proteasome subunit alpha type.	26S proteasome regulatory subunit rpn11.	0.987
FOC4_g10011631	FOC4_g10010469	N1R8T3	N1RBX7	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.987
FOC4_g10011631	FOC4_g10010470	N1R8T3	N1RE58	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Proteasome subunit alpha type.	0.987
FOC4_g10011631	FOC4_g10014317	N1R8T3	N1RGJ2	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Uncharacterized protein.	0.996
FOC4_g10011631	FOC4_g10014318	N1R8T3	N1R8E5	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit rpn11.	0.998
FOC4_g10014317	FOC4_g10006982	N1RGJ2	N1RR18	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.744
FOC4_g10014317	FOC4_g10008739	N1RGJ2	N1RUI3	Uncharacterized protein.	Anaphase-promoting complex subunit 4.	0.656
FOC4_g10014317	FOC4_g10010469	N1RGJ2	N1RBX7	Uncharacterized protein.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.981
FOC4_g10014317	FOC4_g10010470	N1RGJ2	N1RE58	Uncharacterized protein.	Proteasome subunit alpha type.	0.981
FOC4_g10014317	FOC4_g10011631	N1RGJ2	N1R8T3	Uncharacterized protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.996
FOC4_g10014318	FOC4_g10006982	N1R8E5	N1RR18	26S proteasome regulatory subunit rpn11.	WD_REPEATS_REGION domain-containing protein.	0.744