STRINGSTRING
FOC4_g10012904 FOC4_g10012904 FOC4_g10011712 FOC4_g10011712 FOC4_g10015226 FOC4_g10015226 FOC4_g10011703 FOC4_g10011703 FOC4_g10010574 FOC4_g10010574 FOC4_g10015225 FOC4_g10015225 FOC4_g10007429 FOC4_g10007429 FOC4_g10015201 FOC4_g10015201 FOC4_g10007214 FOC4_g10007214 FOC4_g10008224 FOC4_g10008224 FOC4_g10010435 FOC4_g10010435 FOC4_g10007212 FOC4_g10007212
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FOC4_g10012904Checkpoint protein; Belongs to the HUS1 family. (342 aa)
FOC4_g10011712DNA repair protein rhp55. (405 aa)
FOC4_g10015226Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
FOC4_g10011703Replication factor A protein 2. (277 aa)
FOC4_g10010574DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (665 aa)
FOC4_g10015225Vezatin domain-containing protein. (617 aa)
FOC4_g10007429Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (723 aa)
FOC4_g10015201DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1112 aa)
FOC4_g10007214Serine/threonine-protein kinase chk1. (530 aa)
FOC4_g10008224XPG_I_2 domain-containing protein. (573 aa)
FOC4_g10010435Uncharacterized protein. (568 aa)
FOC4_g10007212Serine/threonine-protein kinase chk1. (198 aa)
Your Current Organism:
Fusarium oxysporum f. sp. cubense race 4
NCBI taxonomy Id: 1229665
Other names: F. oxysporum f. sp. cubense race 4
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