(35 nodes) Mitotic cell cycle phase transition network (Fusarium oxysporum f. sp. cubense race 4)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC4_g10010387	HMG box domain-containing protein. (285 aa)
	FOC4_g10006357	Uncharacterized protein. (848 aa)
	FOC4_g10011945	Uncharacterized protein. (1118 aa)
	FOC4_g10011567	Actin-like protein arp5; Belongs to the actin family. (750 aa)
	FOC4_g10011572	Uncharacterized protein. (907 aa)
	FOC4_g10015121	Helicase ATP-binding domain-containing protein. (1094 aa)
	FOC4_g10014547	G1/S-specific cyclin CLN1; Belongs to the cyclin family. (393 aa)
	FOC4_g10015041	M-phase inducer phosphatase. (564 aa)
	FOC4_g10015316	UPF0661 TPR repeat-containing protein C16D10.01c. (363 aa)
	FOC4_g10001871	G1/S-specific cyclin CLN1; Belongs to the cyclin family. (291 aa)
	FOC4_g10009281	Uncharacterized protein. (210 aa)
	FOC4_g10008797	Negative regulator of the PHO system; Belongs to the protein kinase superfamily. (323 aa)
	FOC4_g10008507	Histone deacetylase HOS3. (1080 aa)
	FOC4_g10009283	Uncharacterized protein. (561 aa)
	FOC4_g10012719	Anaphase-promoting complex subunit cut9. (617 aa)
	FOC4_g10008673	Uncharacterized protein. (139 aa)
	FOC4_g10009174	E3 ubiquitin-protein ligase RBX1. (115 aa)
	FOC4_g10000594	G1/S-specific cyclin CLN1; Belongs to the cyclin family. (255 aa)
	FOC4_g10012804	Ubiquitin-conjugating enzyme E2-34 kDa. (224 aa)
	FOC4_g10008674	Protein bimA. (300 aa)
	FOC4_g10011512	Calcium/calmodulin-dependent protein kinase; Belongs to the protein kinase superfamily. (363 aa)
	FOC4_g10012699	Negative regulator of mitosis. (1782 aa)
	FOC4_g10012649	Septin like protein spn2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (338 aa)
	FOC4_g10003011	Uncharacterized protein. (144 aa)
	FOC4_g10005199	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (311 aa)
	FOC4_g10003013	Cell cycle serine/threonine-protein kinase CDC5/MSD2. (1005 aa)
	FOC4_g10008170	Start control protein cdc10. (797 aa)
	FOC4_g10003034	G2/mitotic-specific cyclin-B; Belongs to the cyclin family. (479 aa)
	FOC4_g10015040	M-phase inducer phosphatase. (452 aa)
	FOC4_g10011197	G2/mitotic-specific cyclin-4; Belongs to the cyclin family. (618 aa)
	FOC4_g10010362	Anaphase-promoting complex subunit 8. (638 aa)
	FOC4_g10007178	Serine/threonine-protein phosphatase. (326 aa)
	FOC4_g10013743	Uncharacterized protein. (274 aa)
	FOC4_g10015219	Anaphase-promoting complex subunit 2; Belongs to the cullin family. (867 aa)
	FOC4_g10013420	Cell division cycle-related protein res2/pct1. (675 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 4

NCBI taxonomy Id: 1229665
Other names: F. oxysporum f. sp. cubense race 4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC4_g10000594	FOC4_g10003011	N1RYF6	N1RRD5	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.853
FOC4_g10000594	FOC4_g10003013	N1RYF6	N1RLR1	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Cell cycle serine/threonine-protein kinase CDC5/MSD2.	0.853
FOC4_g10000594	FOC4_g10003034	N1RYF6	N1RJH0	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	0.410
FOC4_g10000594	FOC4_g10005199	N1RYF6	N1RR49	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.910
FOC4_g10000594	FOC4_g10006357	N1RYF6	N1RB92	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.434
FOC4_g10000594	FOC4_g10007178	N1RYF6	N1RD57	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Serine/threonine-protein phosphatase.	0.452
FOC4_g10000594	FOC4_g10008170	N1RYF6	N1RKI9	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Start control protein cdc10.	0.487
FOC4_g10000594	FOC4_g10008673	N1RYF6	N1S175	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.824
FOC4_g10000594	FOC4_g10008674	N1RYF6	N1RUC4	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Protein bimA.	0.824
FOC4_g10000594	FOC4_g10008797	N1RYF6	N1S712	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.910
FOC4_g10000594	FOC4_g10009174	N1RYF6	N1RZA3	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	E3 ubiquitin-protein ligase RBX1.	0.708
FOC4_g10000594	FOC4_g10009281	N1RYF6	N1S860	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.434
FOC4_g10000594	FOC4_g10009283	N1RYF6	N1S2S0	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.434
FOC4_g10000594	FOC4_g10010362	N1RYF6	N1RDU7	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Anaphase-promoting complex subunit 8.	0.805
FOC4_g10000594	FOC4_g10011572	N1RYF6	N1R6F6	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.434
FOC4_g10000594	FOC4_g10011945	N1RYF6	N1R640	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Uncharacterized protein.	0.434
FOC4_g10000594	FOC4_g10012699	N1RYF6	N1RSF2	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Negative regulator of mitosis.	0.670
FOC4_g10000594	FOC4_g10012719	N1RYF6	N1S1B3	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Anaphase-promoting complex subunit cut9.	0.756
FOC4_g10000594	FOC4_g10013420	N1RYF6	N1RCQ9	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	Cell division cycle-related protein res2/pct1.	0.495
FOC4_g10000594	FOC4_g10015040	N1RYF6	N1RIG4	G1/S-specific cyclin CLN1; Belongs to the cyclin family.	M-phase inducer phosphatase.	0.720