26 items (Fusarium oxysporum f. sp. cubense race 4)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC4_g10010294	Nucleoporin nsp1. (715 aa)
	FOC4_g10015018	mRNA export factor MEX67. (658 aa)
	FOC4_g10015340	Uncharacterized protein. (1162 aa)
	FOC4_g10004430	WD repeat-containing protein JIP5. (431 aa)
	FOC4_g10004632	Nuclear envelope protein ndc1. (620 aa)
	FOC4_g10004589	mRNA export protein mlo3. (289 aa)
	FOC4_g10008618	Nup188_C domain-containing protein. (664 aa)
	FOC4_g10008467	Uncharacterized protein. (1370 aa)
	FOC4_g10008762	Uncharacterized protein. (310 aa)
	FOC4_g10008679	Nucleoporin nup82. (851 aa)
	FOC4_g10008644	Uncharacterized protein. (1619 aa)
	FOC4_g10008619	Uncharacterized protein. (857 aa)
	FOC4_g10003070	Uncharacterized protein. (173 aa)
	FOC4_g10006832	Brefeldin A resistance protein. (438 aa)
	FOC4_g10008032	Uncharacterized protein. (257 aa)
	FOC4_g10008031	Uncharacterized protein. (598 aa)
	FOC4_g10003071	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (594 aa)
	FOC4_g10008095	Pre-mRNA polyadenylation factor FIP1. (328 aa)
	FOC4_g10008033	Ran-specific GTPase-activating protein 1. (237 aa)
	FOC4_g10007137	Nucleoporin NIC96. (1161 aa)
	FOC4_g10013921	Uncharacterized protein. (1381 aa)
	FOC4_g10013788	Nucleoporin nup61. (1172 aa)
	FOC4_g10013544	Poly(A)+ RNA export protein. (358 aa)
	FOC4_g10014801	Uncharacterized protein. (1499 aa)
	FOC4_g10010284	RNA and export factor-binding protein 2. (330 aa)
	FOC4_g10004631	Nuclear envelope protein ndc1. (488 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 4

NCBI taxonomy Id: 1229665
Other names: F. oxysporum f. sp. cubense race 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC4_g10003070	FOC4_g10004589	N1RRJ8	N1S339	Uncharacterized protein.	mRNA export protein mlo3.	0.669
FOC4_g10003070	FOC4_g10004631	N1RRJ8	N1SBC7	Uncharacterized protein.	Nuclear envelope protein ndc1.	0.424
FOC4_g10003070	FOC4_g10004632	N1RRJ8	N1S6T8	Uncharacterized protein.	Nuclear envelope protein ndc1.	0.424
FOC4_g10003070	FOC4_g10006832	N1RRJ8	N1RQN3	Uncharacterized protein.	Brefeldin A resistance protein.	0.869
FOC4_g10003070	FOC4_g10007137	N1RRJ8	N1RG13	Uncharacterized protein.	Nucleoporin NIC96.	0.988
FOC4_g10003070	FOC4_g10008031	N1RRJ8	N1RK72	Uncharacterized protein.	Uncharacterized protein.	0.869
FOC4_g10003070	FOC4_g10008032	N1RRJ8	N1RP93	Uncharacterized protein.	Uncharacterized protein.	0.869
FOC4_g10003070	FOC4_g10008033	N1RRJ8	N1RH59	Uncharacterized protein.	Ran-specific GTPase-activating protein 1.	0.869
FOC4_g10003070	FOC4_g10008467	N1RRJ8	N1S0K5	Uncharacterized protein.	Uncharacterized protein.	0.985
FOC4_g10003070	FOC4_g10008618	N1RRJ8	N1S103	Uncharacterized protein.	Nup188_C domain-containing protein.	0.824
FOC4_g10003070	FOC4_g10008619	N1RRJ8	N1RU53	Uncharacterized protein.	Uncharacterized protein.	0.824
FOC4_g10003070	FOC4_g10008644	N1RRJ8	N1RU78	Uncharacterized protein.	Uncharacterized protein.	0.990
FOC4_g10003070	FOC4_g10010284	N1RRJ8	N1RBK3	Uncharacterized protein.	RNA and export factor-binding protein 2.	0.669
FOC4_g10003070	FOC4_g10010294	N1RRJ8	N1RBL0	Uncharacterized protein.	Nucleoporin nsp1.	0.984
FOC4_g10003070	FOC4_g10013544	N1RRJ8	N1RCL3	Uncharacterized protein.	Poly(A)+ RNA export protein.	0.864
FOC4_g10003070	FOC4_g10013788	N1RRJ8	N1RD39	Uncharacterized protein.	Nucleoporin nup61.	0.985
FOC4_g10003070	FOC4_g10013921	N1RRJ8	N1RDS6	Uncharacterized protein.	Uncharacterized protein.	0.996
FOC4_g10003070	FOC4_g10014801	N1RRJ8	N1RBX5	Uncharacterized protein.	Uncharacterized protein.	0.984
FOC4_g10003070	FOC4_g10015018	N1RRJ8	N1R9D0	Uncharacterized protein.	mRNA export factor MEX67.	0.957
FOC4_g10003070	FOC4_g10015340	N1RRJ8	N1R839	Uncharacterized protein.	Uncharacterized protein.	0.978