(15 nodes) Proteasome subunit network (Fusarium oxysporum f. sp. cubense race 4)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FOC4_g10014802	Proteasome component PUP1. (270 aa)
	FOC4_g10011943	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (342 aa)
	FOC4_g10015432	Proteasome component PUP3. (191 aa)
	FOC4_g10006120	Proteasome subunit alpha type. (277 aa)
	FOC4_g10015393	Proteasome subunit beta; Belongs to the peptidase T1B family. (261 aa)
	FOC4_g10013594	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (253 aa)
	FOC4_g10010469	Proteasome endopeptidase complex; Belongs to the peptidase T1A family. (417 aa)
	FOC4_g10015037	Proteasome subunit alpha type. (295 aa)
	FOC4_g10015344	Proteasome component C5. (264 aa)
	FOC4_g10010337	Proteasome subunit beta. (182 aa)
	FOC4_g10010470	Proteasome subunit alpha type. (269 aa)
	FOC4_g10011501	Proteasome subunit beta. (282 aa)
	FOC4_g10011499	Proteasome component PRE2. (111 aa)
	FOC4_g10012894	Proteasome subunit alpha type. (263 aa)
	FOC4_g10008513	Proteasome subunit beta. (234 aa)

Your Current Organism:

Fusarium oxysporum f. sp. cubense race 4

NCBI taxonomy Id: 1229665
Other names: F. oxysporum f. sp. cubense race 4

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FOC4_g10006120	FOC4_g10008513	N1R8I4	N1RXD5	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
FOC4_g10006120	FOC4_g10010337	N1R8I4	N1RDS5	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
FOC4_g10006120	FOC4_g10010469	N1R8I4	N1RBX7	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.998
FOC4_g10006120	FOC4_g10010470	N1R8I4	N1RE58	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
FOC4_g10006120	FOC4_g10011499	N1R8I4	N1RN31	Proteasome subunit alpha type.	Proteasome component PRE2.	0.994
FOC4_g10006120	FOC4_g10011501	N1R8I4	N1RII5	Proteasome subunit alpha type.	Proteasome subunit beta.	0.994
FOC4_g10006120	FOC4_g10011943	N1R8I4	N1R7B9	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
FOC4_g10006120	FOC4_g10012894	N1R8I4	N1RPB8	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
FOC4_g10006120	FOC4_g10013594	N1R8I4	N1RAH7	Proteasome subunit alpha type.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.999
FOC4_g10006120	FOC4_g10014802	N1R8I4	N1R784	Proteasome subunit alpha type.	Proteasome component PUP1.	0.999
FOC4_g10006120	FOC4_g10015037	N1R8I4	N1RCD5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
FOC4_g10006120	FOC4_g10015344	N1R8I4	N1RD45	Proteasome subunit alpha type.	Proteasome component C5.	0.999
FOC4_g10006120	FOC4_g10015393	N1R8I4	N1RA89	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.998
FOC4_g10006120	FOC4_g10015432	N1R8I4	N1R888	Proteasome subunit alpha type.	Proteasome component PUP3.	0.999
FOC4_g10008513	FOC4_g10006120	N1RXD5	N1R8I4	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
FOC4_g10008513	FOC4_g10010337	N1RXD5	N1RDS5	Proteasome subunit beta.	Proteasome subunit beta.	0.999
FOC4_g10008513	FOC4_g10010469	N1RXD5	N1RBX7	Proteasome subunit beta.	Proteasome endopeptidase complex; Belongs to the peptidase T1A family.	0.997
FOC4_g10008513	FOC4_g10010470	N1RXD5	N1RE58	Proteasome subunit beta.	Proteasome subunit alpha type.	0.997
FOC4_g10008513	FOC4_g10011499	N1RXD5	N1RN31	Proteasome subunit beta.	Proteasome component PRE2.	0.998
FOC4_g10008513	FOC4_g10011501	N1RXD5	N1RII5	Proteasome subunit beta.	Proteasome subunit beta.	0.998