STRINGSTRING
VPNG_09866 VPNG_09866 VPNG_09388 VPNG_09388 VPNG_08952 VPNG_08952 VPNG_08423 VPNG_08423 VPNG_07557 VPNG_07557 VPNG_06700 VPNG_06700 VPNG_06920 VPNG_06920 VPNG_06242 VPNG_06242 VPNG_06385 VPNG_06385 VPNG_05703 VPNG_05703 VPNG_06507 VPNG_06507 VPNG_06526 VPNG_06526 NAT10 NAT10 VPNG_05418 VPNG_05418 VPNG_04369 VPNG_04369 VPNG_03968 VPNG_03968 VPNG_03195 VPNG_03195 VPNG_03823 VPNG_03823 VPNG_02052 VPNG_02052 VPNG_01930 VPNG_01930 VPNG_00136 VPNG_00136
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VPNG_09866WD_REPEATS_REGION domain-containing protein. (910 aa)
VPNG_09388WD_REPEATS_REGION domain-containing protein. (1046 aa)
VPNG_08952Uncharacterized protein. (377 aa)
VPNG_08423WD_REPEATS_REGION domain-containing protein. (549 aa)
VPNG_07557WD_REPEATS_REGION domain-containing protein. (962 aa)
VPNG_06700NUC153 domain-containing protein. (639 aa)
VPNG_06920Brix domain-containing protein. (295 aa)
VPNG_06242Utp12 domain-containing protein. (404 aa)
VPNG_06385Uncharacterized protein. (407 aa)
VPNG_05703WD_REPEATS_REGION domain-containing protein. (900 aa)
VPNG_06507U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (684 aa)
VPNG_06526S4 RNA-binding domain-containing protein. (183 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1064 aa)
VPNG_05418Uncharacterized protein. (315 aa)
VPNG_04369Uncharacterized protein. (573 aa)
VPNG_03968BP28CT domain-containing protein. (1794 aa)
VPNG_03195Bms1-type G domain-containing protein. (1151 aa)
VPNG_03823WD_REPEATS_REGION domain-containing protein. (890 aa)
VPNG_02052U3 small nucleolar RNA-associated protein 22. (1094 aa)
VPNG_01930Uncharacterized protein. (407 aa)
VPNG_00136Uncharacterized protein. (601 aa)
Your Current Organism:
Cytospora leucostoma
NCBI taxonomy Id: 1230097
Other names: C. leucostoma, Leucostoma leucostoma, Leucostoma persoonii, Valsa leucostoma, Valsa persoonii
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