(53 nodes) WD40 repeat, conserved site network (Cytospora leucostoma)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPNG_04928	WD_REPEATS_REGION domain-containing protein. (1382 aa)
	VPNG_10162	Uncharacterized protein. (1026 aa)
	VPNG_09866	WD_REPEATS_REGION domain-containing protein. (910 aa)
	VPNG_09876	WD_REPEATS_REGION domain-containing protein. (373 aa)
	VPNG_09444	WD_REPEATS_REGION domain-containing protein. (1029 aa)
	VPNG_09388	WD_REPEATS_REGION domain-containing protein. (1046 aa)
	VPNG_08932	Uncharacterized protein. (977 aa)
	VPNG_09235	WD_REPEATS_REGION domain-containing protein. (835 aa)
	VPNG_08423	WD_REPEATS_REGION domain-containing protein. (549 aa)
	VPNG_08194	Uncharacterized protein. (480 aa)
	VPNG_07747	WD_REPEATS_REGION domain-containing protein. (318 aa)
	VPNG_08324	WD_REPEATS_REGION domain-containing protein. (521 aa)
	VPNG_07557	WD_REPEATS_REGION domain-containing protein. (962 aa)
	VPNG_07780	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1217 aa)
	VPNG_07849	Uncharacterized protein. (1009 aa)
	VPNG_07393	Uncharacterized protein. (643 aa)
	VPNG_06976	WD_REPEATS_REGION domain-containing protein. (494 aa)
	VPNG_06680	WD_REPEATS_REGION domain-containing protein. (457 aa)
	VPNG_06799	WD_REPEATS_REGION domain-containing protein. (352 aa)
	VPNG_06874	WD_REPEATS_REGION domain-containing protein. (495 aa)
	VPNG_06183	WD_REPEATS_REGION domain-containing protein. (328 aa)
	VPNG_05780	WD_REPEATS_REGION domain-containing protein. (608 aa)
	VPNG_05703	WD_REPEATS_REGION domain-containing protein. (900 aa)
	VPNG_06560	WD_REPEATS_REGION domain-containing protein. (320 aa)
	TIF34	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (338 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (492 aa)
	VPNG_04683	Uncharacterized protein. (664 aa)
	VPNG_04694	WD_REPEATS_REGION domain-containing protein. (444 aa)
	VPNG_05988	WD_REPEATS_REGION domain-containing protein. (584 aa)
	VPNG_05990	Coronin; Belongs to the WD repeat coronin family. (613 aa)
	VPNG_04263	WD_REPEATS_REGION domain-containing protein. (470 aa)
	VPNG_04290	WD_REPEATS_REGION domain-containing protein. (533 aa)
	VPNG_04206	WD_REPEATS_REGION domain-containing protein. (578 aa)
	VPNG_04219	Uncharacterized protein. (1230 aa)
	VPNG_03145	WD_REPEATS_REGION domain-containing protein. (631 aa)
	VPNG_03428	Uncharacterized protein. (844 aa)
	VPNG_03353	WD_REPEATS_REGION domain-containing protein. (606 aa)
	VPNG_02380	WD_REPEATS_REGION domain-containing protein. (813 aa)
	VPNG_02283	WD_REPEATS_REGION domain-containing protein. (433 aa)
	PAC1	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs. (459 aa)
	VPNG_02291	WD_REPEATS_REGION domain-containing protein. (352 aa)
	VPNG_02093	WD_REPEATS_REGION domain-containing protein. (984 aa)
	VPNG_01967	WD_REPEATS_REGION domain-containing protein. (596 aa)
	VPNG_01790	WD_REPEATS_REGION domain-containing protein. (512 aa)
	VPNG_01838	Uncharacterized protein. (343 aa)
	PAC1-2	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs. (430 aa)
	VPNG_01182	WD_REPEATS_REGION domain-containing protein. (548 aa)
	VPNG_01029	WD_REPEATS_REGION domain-containing protein. (396 aa)
	VPNG_00391	WD_REPEATS_REGION domain-containing protein. (495 aa)
	VPNG_00524	Uncharacterized protein. (664 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (824 aa)
	VPNG_00227	WD_REPEATS_REGION domain-containing protein. (534 aa)
	VPNG_00110	WD_REPEATS_REGION domain-containing protein. (451 aa)

Your Current Organism:

Cytospora leucostoma

NCBI taxonomy Id: 1230097
Other names: C. leucostoma, Leucostoma leucostoma, Leucostoma persoonii, Valsa leucostoma, Valsa persoonii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	VPNG_00227	A0A423XNB6	A0A423XNL7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.890
ERB1	VPNG_01182	A0A423XNB6	A0A423XM25	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.932
ERB1	VPNG_02291	A0A423XNB6	A0A423XGV9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.756
ERB1	VPNG_02380	A0A423XNB6	A0A423XGI4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.756
ERB1	VPNG_04206	A0A423XNB6	A0A423XDS0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.756
ERB1	VPNG_04683	A0A423XNB6	A0A423XAB2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.756
ERB1	VPNG_04694	A0A423XNB6	A0A423XAJ7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.615
ERB1	VPNG_05703	A0A423XNB6	A0A423X054	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.929
ERB1	VPNG_06680	A0A423XNB6	A0A423WU64	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.756
ERB1	VPNG_06976	A0A423XNB6	A0A423WNB0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.909
ERB1	VPNG_07557	A0A423XNB6	A0A423WDU6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.942
ERB1	VPNG_08324	A0A423XNB6	A0A423W9N0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.918
ERB1	VPNG_08423	A0A423XNB6	A0A423W640	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.652
ERB1	VPNG_09388	A0A423XNB6	A0A423VTK1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.921
ERB1	VPNG_09866	A0A423XNB6	A0A423VNL0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.928
ERB1	YTM1	A0A423XNB6	A0A423X6T3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
PAC1	VPNG_00110	A0A423XGL5	A0A423XP30	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs.	WD_REPEATS_REGION domain-containing protein.	0.437
PAC1	VPNG_00524	A0A423XGL5	A0A423XN85	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs.	Uncharacterized protein.	0.494
PAC1	VPNG_02291	A0A423XGL5	A0A423XGV9	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs.	WD_REPEATS_REGION domain-containing protein.	0.727
PAC1	VPNG_02380	A0A423XGL5	A0A423XGI4	Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs.	WD_REPEATS_REGION domain-containing protein.	0.506