(5 nodes) Cation transporter, and Regulator of K+ conductance, N-terminal network (Salimicrobium jeotgali)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKG04700.1	Potassium transporter Trk. (222 aa)
	AAV35_007840	Phytoene desaturase; Frameshifted. (450 aa)
	AKG05170.1	Anion transporter. (551 aa)
	AKG05299.1	Potassium transporter Trk. (221 aa)
	AKG05300.1	Ktr system potassium transporter B. (437 aa)

Your Current Organism:

Salimicrobium jeotgali

NCBI taxonomy Id: 1230341
Other names: JCM 19758, KACC 16972, S. jeotgali, Salimicrobium jeotgali Choi et al. 2014, Salimicrobium sp. MJ3, strain MJ3

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAV35_007840	AKG04700.1	AAV35_007840	AAV35_007730	Phytoene desaturase; Frameshifted.	Potassium transporter Trk.	0.953
AAV35_007840	AKG05299.1	AAV35_007840	AAV35_011240	Phytoene desaturase; Frameshifted.	Potassium transporter Trk.	0.953
AKG04700.1	AAV35_007840	AAV35_007730	AAV35_007840	Potassium transporter Trk.	Phytoene desaturase; Frameshifted.	0.953
AKG04700.1	AKG05300.1	AAV35_007730	AAV35_011245	Potassium transporter Trk.	Ktr system potassium transporter B.	0.953
AKG05299.1	AAV35_007840	AAV35_011240	AAV35_007840	Potassium transporter Trk.	Phytoene desaturase; Frameshifted.	0.953
AKG05299.1	AKG05300.1	AAV35_011240	AAV35_011245	Potassium transporter Trk.	Ktr system potassium transporter B.	0.975
AKG05300.1	AKG04700.1	AAV35_011245	AAV35_007730	Ktr system potassium transporter B.	Potassium transporter Trk.	0.953
AKG05300.1	AKG05299.1	AAV35_011245	AAV35_011240	Ktr system potassium transporter B.	Potassium transporter Trk.	0.975