Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKG04508.1 | AKG04509.1 | AAV35_006710 | AAV35_006715 | Type I glutamate--ammonia ligase. | MerR family transcriptional regulator. | 0.983 |
| AKG04508.1 | AKG04510.1 | AAV35_006710 | AAV35_006720 | Type I glutamate--ammonia ligase. | Hypothetical protein. | 0.543 |
| AKG04508.1 | hflX | AAV35_006710 | AAV35_006725 | Type I glutamate--ammonia ligase. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.553 |
| AKG04508.1 | hfq | AAV35_006710 | AAV35_006730 | Type I glutamate--ammonia ligase. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.412 |
| AKG04509.1 | AKG04508.1 | AAV35_006715 | AAV35_006710 | MerR family transcriptional regulator. | Type I glutamate--ammonia ligase. | 0.983 |
| AKG04509.1 | AKG04510.1 | AAV35_006715 | AAV35_006720 | MerR family transcriptional regulator. | Hypothetical protein. | 0.566 |
| AKG04509.1 | hflX | AAV35_006715 | AAV35_006725 | MerR family transcriptional regulator. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.566 |
| AKG04510.1 | AKG04508.1 | AAV35_006720 | AAV35_006710 | Hypothetical protein. | Type I glutamate--ammonia ligase. | 0.543 |
| AKG04510.1 | AKG04509.1 | AAV35_006720 | AAV35_006715 | Hypothetical protein. | MerR family transcriptional regulator. | 0.566 |
| AKG04510.1 | hflX | AAV35_006720 | AAV35_006725 | Hypothetical protein. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.857 |
| AKG04510.1 | hfq | AAV35_006720 | AAV35_006730 | Hypothetical protein. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.515 |
| AKG04510.1 | miaA | AAV35_006720 | AAV35_006735 | Hypothetical protein. | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.595 |
| hflX | AKG04508.1 | AAV35_006725 | AAV35_006710 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Type I glutamate--ammonia ligase. | 0.553 |
| hflX | AKG04509.1 | AAV35_006725 | AAV35_006715 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | MerR family transcriptional regulator. | 0.566 |
| hflX | AKG04510.1 | AAV35_006725 | AAV35_006720 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Hypothetical protein. | 0.857 |
| hflX | hfq | AAV35_006725 | AAV35_006730 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.662 |
| hflX | miaA | AAV35_006725 | AAV35_006735 | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.828 |
| hfq | AKG04508.1 | AAV35_006730 | AAV35_006710 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Type I glutamate--ammonia ligase. | 0.412 |
| hfq | AKG04510.1 | AAV35_006730 | AAV35_006720 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Hypothetical protein. | 0.515 |
| hfq | hflX | AAV35_006730 | AAV35_006725 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.662 |
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