STRINGSTRING
AKG03978.1 AKG03978.1 AKG03979.1 AKG03979.1 AKG03980.1 AKG03980.1 AKG03981.1 AKG03981.1 AKG03982.1 AKG03982.1 AKG03983.1 AKG03983.1 AKG03984.1 AKG03984.1 AKG05685.1 AKG05685.1 AKG03985.1 AKG03985.1 AKG04974.1 AKG04974.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKG03978.1Fe-S cluster assembly ATPase SufC. (260 aa)
AKG03979.1Fe-S cluster assembly protein SufD. (435 aa)
AKG03980.1Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (406 aa)
AKG03981.1SUF system NifU family Fe-S cluster assembly protein. (147 aa)
AKG03982.1Fe-S cluster assembly protein SufB. (465 aa)
AKG03983.1Hypothetical protein. (342 aa)
AKG03984.1Transcriptional regulator. (74 aa)
AKG05685.1Hypothetical protein. (136 aa)
AKG03985.1Hypothetical protein. (119 aa)
AKG04974.1DNA methyltransferase. (103 aa)
Your Current Organism:
Salimicrobium jeotgali
NCBI taxonomy Id: 1230341
Other names: JCM 19758, KACC 16972, S. jeotgali, Salimicrobium jeotgali Choi et al. 2014, Salimicrobium sp. MJ3, strain MJ3
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