31 items (Bacteroides sartorii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C802_00242	Hypothetical protein. (138 aa)
	C802_00438	Succinate CoA transferase. (497 aa)
	C802_00448	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. (148 aa)
	argB	Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (257 aa)
	C802_00702	Hypothetical protein. (452 aa)
	C802_00747	xaa-Pro aminopeptidase. (457 aa)
	argC	N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (322 aa)
	C802_00962	acetyl-CoA synthetase. (550 aa)
	lpxA	acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (255 aa)
	ilvC	Ketol-acid reductoisomerase. (347 aa)
	bioB	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (319 aa)
	C802_01674	Hypothetical protein. (125 aa)
	C802_01975	Glutamate synthase, NADH/NADPH, small subunit. (470 aa)
	C802_01976	Glutamate synthase (NADPH/NADH) large chain. (1492 aa)
	C802_02178	Hypothetical protein. (442 aa)
	C802_02210	Hypothetical protein. (272 aa)
	leuA	2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (498 aa)
	C802_02674	D-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (511 aa)
	C802_02787	Branched-chain amino acid aminotransferase. (339 aa)
	C802_03171	Arginase; Belongs to the arginase family. (348 aa)
	C802_03256	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase. (124 aa)
	C802_03426	Hypothetical protein. (360 aa)
	C802_03650	Glutamate synthase (NADPH), homotetrameric. (765 aa)
	C802_03782	acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase. (255 aa)
	C802_03834	CDP-diacylglycerol-serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (235 aa)
	C802_04074	[FeFe] hydrogenase H-cluster radical SAM maturase HydE. (344 aa)
	C802_04106	Electron transfer flavoprotein alpha subunit. (339 aa)
	C802_04313	xaa-Pro aminopeptidase. (463 aa)
	C802_04324	Queuosine biosynthesis protein QueD. (103 aa)
	C802_04407	Hypothetical protein. (205 aa)
	rpsB	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (279 aa)

Your Current Organism:

Bacteroides sartorii

NCBI taxonomy Id: 1235788
Other names: B. sartorii dnLKV3, Bacteroides sartorii dnLKV3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C802_00438	C802_00962	C802_00438	C802_00962	Succinate CoA transferase.	acetyl-CoA synthetase.	0.815
C802_00438	C802_02674	C802_00438	C802_02674	Succinate CoA transferase.	D-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.	0.415
C802_00438	leuA	C802_00438	C802_02671	Succinate CoA transferase.	2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.	0.467
C802_00448	C802_02787	C802_00448	C802_02787	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.	Branched-chain amino acid aminotransferase.	0.448
C802_00448	C802_04324	C802_00448	C802_04324	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase.	Queuosine biosynthesis protein QueD.	0.596
C802_00962	C802_00438	C802_00962	C802_00438	acetyl-CoA synthetase.	Succinate CoA transferase.	0.815
C802_00962	C802_01976	C802_00962	C802_01976	acetyl-CoA synthetase.	Glutamate synthase (NADPH/NADH) large chain.	0.684
C802_00962	C802_02674	C802_00962	C802_02674	acetyl-CoA synthetase.	D-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.	0.611
C802_00962	C802_02787	C802_00962	C802_02787	acetyl-CoA synthetase.	Branched-chain amino acid aminotransferase.	0.471
C802_00962	C802_03426	C802_00962	C802_03426	acetyl-CoA synthetase.	Hypothetical protein.	0.584
C802_00962	C802_04106	C802_00962	C802_04106	acetyl-CoA synthetase.	Electron transfer flavoprotein alpha subunit.	0.440
C802_00962	leuA	C802_00962	C802_02671	acetyl-CoA synthetase.	2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.	0.879
C802_01674	rpsB	C802_01674	C802_04411	Hypothetical protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.613
C802_01975	C802_01976	C802_01975	C802_01976	Glutamate synthase, NADH/NADPH, small subunit.	Glutamate synthase (NADPH/NADH) large chain.	0.999
C802_01975	C802_03650	C802_01975	C802_03650	Glutamate synthase, NADH/NADPH, small subunit.	Glutamate synthase (NADPH), homotetrameric.	0.880
C802_01975	C802_04106	C802_01975	C802_04106	Glutamate synthase, NADH/NADPH, small subunit.	Electron transfer flavoprotein alpha subunit.	0.667
C802_01976	C802_00962	C802_01976	C802_00962	Glutamate synthase (NADPH/NADH) large chain.	acetyl-CoA synthetase.	0.684
C802_01976	C802_01975	C802_01976	C802_01975	Glutamate synthase (NADPH/NADH) large chain.	Glutamate synthase, NADH/NADPH, small subunit.	0.999
C802_01976	C802_02178	C802_01976	C802_02178	Glutamate synthase (NADPH/NADH) large chain.	Hypothetical protein.	0.482
C802_01976	C802_02674	C802_01976	C802_02674	Glutamate synthase (NADPH/NADH) large chain.	D-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.	0.424