STRINGSTRING
pckA pckA C802_00037 C802_00037 C802_00038 C802_00038 C802_00251 C802_00251 C802_00327 C802_00327 accC accC C802_00962 C802_00962 ackA ackA pta pta C802_01072 C802_01072 C802_01350 C802_01350 C802_01361 C802_01361 C802_01420 C802_01420 pflB pflB C802_01712 C802_01712 C802_02169 C802_02169 vorB vorB C802_02481 C802_02481 C802_02522 C802_02522 leuA leuA mdh mdh C802_02804 C802_02804 C802_02872 C802_02872 C802_02873 C802_02873 C802_02874 C802_02874 C802_02999 C802_02999 C802_03270 C802_03270 C802_03280 C802_03280 C802_03617 C802_03617 nifJ nifJ C802_03786 C802_03786 C802_03873 C802_03873 C802_04263 C802_04263
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pckAPhosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (535 aa)
C802_000372-oxoglutarate ferredoxin oxidoreductase subunit beta. (334 aa)
C802_000382-oxoacid:acceptor oxidoreductase, alpha subunit. (615 aa)
C802_00251Hypothetical protein. (121 aa)
C802_00327Dihydrolipoyl dehydrogenase. (446 aa)
accCacetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (503 aa)
C802_00962acetyl-CoA synthetase. (550 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)
ptaPhosphate acetyltransferase. (337 aa)
C802_01072Malate dehydrogenase; Belongs to the LDH/MDH superfamily. (333 aa)
C802_01350Sodium ion-translocating decarboxylase, beta subunit. (386 aa)
C802_01361D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (335 aa)
C802_01420Sodium ion-translocating decarboxylase, beta subunit. (404 aa)
pflBFormate acetyltransferase. (742 aa)
C802_01712Lactoylglutathione lyase. (125 aa)
C802_02169Hypothetical protein. (203 aa)
vorB2-oxoglutarate ferredoxin oxidoreductase subunit alpha. (360 aa)
C802_024812-oxoglutarate ferredoxin oxidoreductase subunit beta. (254 aa)
C802_02522Indolepyruvate ferredoxin oxidoreductase, beta subunit. (193 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (498 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (313 aa)
C802_02804Hypothetical protein. (985 aa)
C802_02872Oxaloacetate decarboxylase, gamma subunit. (83 aa)
C802_02873Pyruvate carboxylase subunit B. (621 aa)
C802_02874Sodium ion-translocating decarboxylase, beta subunit. (411 aa)
C802_02999Pyruvate kinase; Belongs to the pyruvate kinase family. (487 aa)
C802_03270Hypothetical protein. (616 aa)
C802_03280Pyruvate, phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (924 aa)
C802_03617Hypothetical protein. (403 aa)
nifJPyruvate:ferredoxin (flavodoxin) oxidoreductase. (1181 aa)
C802_03786Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). (761 aa)
C802_03873Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (547 aa)
C802_04263Dihydrolipoyl dehydrogenase. (449 aa)
Your Current Organism:
Bacteroides sartorii
NCBI taxonomy Id: 1235788
Other names: B. sartorii dnLKV3, Bacteroides sartorii dnLKV3
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