STRINGSTRING
GCA_000613385_00456 GCA_000613385_00456 rplT rplT cutC cutC GCA_000613385_01276 GCA_000613385_01276 typA typA D7Y07_11480 D7Y07_11480 argR argR GCA_000613385_02043 GCA_000613385_02043 D7Y07_13410 D7Y07_13410 D7Y07_02490 D7Y07_02490 D7Y07_01440 D7Y07_01440 GCA_000613385_04107 GCA_000613385_04107 GCA_000613385_04108 GCA_000613385_04108 GCA_000613385_04115 GCA_000613385_04115 D7Y07_03505 D7Y07_03505 ftsZ ftsZ GCA_000613385_04720 GCA_000613385_04720 D7Y07_05485 D7Y07_05485
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000613385_00456Unannotated protein. (503 aa)
rplTUnannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (116 aa)
cutCUnannotated protein; Participates in the control of copper homeostasis. Belongs to the CutC family. (172 aa)
GCA_000613385_01276Unannotated protein. (74 aa)
typAUnannotated protein. (645 aa)
D7Y07_11480Unannotated protein. (363 aa)
argRUnannotated protein; Regulates arginine biosynthesis genes. (157 aa)
GCA_000613385_02043Unannotated protein. (211 aa)
D7Y07_13410Unannotated protein. (467 aa)
D7Y07_02490Unannotated protein. (475 aa)
D7Y07_01440Unannotated protein. (120 aa)
GCA_000613385_04107Unannotated protein. (84 aa)
GCA_000613385_04108Unannotated protein. (349 aa)
GCA_000613385_04115Unannotated protein. (414 aa)
D7Y07_03505Unannotated protein. (419 aa)
ftsZUnannotated protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (335 aa)
GCA_000613385_04720Unannotated protein. (88 aa)
D7Y07_05485Unannotated protein. (590 aa)
Your Current Organism:
Bacteroides acidifaciens
NCBI taxonomy Id: 1235814
Other names: B. acidifaciens JCM 10556, Bacteroides acidifaciens JCM 10556
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