STRINGSTRING
btuB_1 btuB_1 btuB_2 btuB_2 bfrA bfrA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
btuB_1TonB-dependent vitamin B12 receptor. (650 aa)
btuB_2TonB-dependent outer membrane receptor. (720 aa)
bfrAExogenous ferric siderophore receptor. (660 aa)
Your Current Organism:
Bordetella trematum
NCBI taxonomy Id: 123899
Other names: B. trematum, CCUG 32381, CIP 105351, DSM 11334, LMG 13506, LMG:13506, NCTC 12995
Server load: medium (54%) [HD]