Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE76018.1 | ecfA1 | ARA02_01065 | ARA02_01045 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.569 |
| APE76018.1 | ecfA2 | ARA02_01065 | ARA02_01050 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.569 |
| APE76018.1 | ecfT_1 | ARA02_01065 | ARA02_01055 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt ABC transporter ATP-binding protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.577 |
| APE76018.1 | truA | ARA02_01065 | ARA02_01060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine(38,39,40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.618 |
| APE76165.1 | panT_1 | ARA02_01890 | ARA02_02995 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pantothenate transporter pant; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.467 |
| APE76165.1 | panT_2 | ARA02_01890 | ARA02_03005 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pantothenate transporter pant; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.540 |
| APE76484.1 | ykoC | ARA02_03700 | ARA02_03690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
| APE76484.1 | ykoD_1 | ARA02_03700 | ARA02_03695 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Energy-coupling factor ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
| APE76484.1 | ykoE_1 | ARA02_03700 | ARA02_03705 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.810 |
| APE77096.1 | APE77529.1 | ARA02_07070 | ARA02_07065 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.709 |
| APE77096.1 | ARA02_08855 | ARA02_07070 | ARA02_08855 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Energy-coupling factor ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
| APE77096.1 | bioY | ARA02_07070 | ARA02_02480 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biotin biosynthesis protein BioY; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.907 |
| APE77096.1 | ecfA1 | ARA02_07070 | ARA02_01045 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.931 |
| APE77096.1 | ecfA2 | ARA02_07070 | ARA02_01050 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.931 |
| APE77096.1 | ecfT_1 | ARA02_07070 | ARA02_01055 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt ABC transporter ATP-binding protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.900 |
| APE77096.1 | ecfT_2 | ARA02_07070 | ARA02_08845 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APE77096.1 | panT_1 | ARA02_07070 | ARA02_02995 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pantothenate transporter pant; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APE77096.1 | panT_2 | ARA02_07070 | ARA02_03005 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pantothenate transporter pant; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APE77096.1 | truA | ARA02_07070 | ARA02_01060 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA pseudouridine(38,39,40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.459 |
| APE77096.1 | ykoC | ARA02_07070 | ARA02_03690 | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
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