STRINGSTRING
S58_33900 S58_33900 S58_15100 S58_15100 nirK nirK S58_10650 S58_10650 napD-2 napD-2 S58_40560 S58_40560 S58_39790 S58_39790 S58_37600 S58_37600 S58_15940 S58_15940
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
S58_33900Multicopper oxidase. (432 aa)
S58_15100Putative ferredoxin. (112 aa)
nirKCopper-containing Nitrite reductase (NO-forming) NirK; Belongs to the multicopper oxidase family. (364 aa)
S58_10650Toluene-4-monooxygenase system protein C. (126 aa)
napD-2Nitrate reductase catalytic subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (834 aa)
S58_40560Hypothetical protein. (137 aa)
S58_39790Putative formate dehydrogenase (C-terminal), related to acid resistance with formate dehydrogenase/DMSO reductase, domains 1-3 and ADC-like domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (761 aa)
S58_37600Rieske domain-containing protein; Conserved hypothetical protein with a ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenases. (110 aa)
S58_15940Multicopper oxidase. (736 aa)
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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