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S58_30930 S58_30930 S58_33110 S58_33110 ctaA ctaA S58_37560 S58_37560 S58_59250 S58_59250 S58_69840 S58_69840 S58_59230 S58_59230 S58_59220 S58_59220 S58_59200 S58_59200 S58_59180 S58_59180 S58_59170 S58_59170 S58_68200 S58_68200 bchB bchB bchL bchL acsF acsF S58_58870 S58_58870 S58_58860 S58_58860 S58_58850 S58_58850 S58_56830 S58_56830 hemE hemE hemF hemF S58_52650 S58_52650 S58_49910 S58_49910 S58_49900 S58_49900 S58_45460 S58_45460 S58_59160 S58_59160 S58_59050 S58_59050 S58_59040 S58_59040 S58_59030 S58_59030 S58_59000 S58_59000 bchN bchN S58_68170 S58_68170 S58_68160 S58_68160 S58_68150 S58_68150 S58_68130 S58_68130 hemH hemH S58_62300 S58_62300 S58_60380 S58_60380 S58_60370 S58_60370 S58_60280 S58_60280 S58_59300 S58_59300 S58_59290 S58_59290 S58_59260 S58_59260 S58_02100 S58_02100 S58_03040 S58_03040 S58_06110 S58_06110 ctaB ctaB S58_07840 S58_07840 S58_09210 S58_09210 S58_11720 S58_11720 S58_13410 S58_13410 S58_19200 S58_19200 S58_19720 S58_19720
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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S58_309305-aminolevulinate synthase. (425 aa)
S58_33110Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (353 aa)
ctaAPutative cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (359 aa)
S58_375605-aminolevulinate synthase. (409 aa)
S58_59250Phytoene synthase. (346 aa)
S58_69840Putative phytoene dehydrogenase and related proteins. (707 aa)
S58_59230Neurosporene and anhydrorhodovibrin hydratase. (270 aa)
S58_59220Hydroxyneurosporene and rhodopin dehydrogenase. (509 aa)
S58_59200hydroxyneurosporene-O-methyltransferase. (381 aa)
S58_59180Bacteriochlorophyllide reductase subunit; Belongs to the NifH/BchL/ChlL family. (332 aa)
S58_59170Bacteriochlorophyllide reductase subunit 52.5 kDa chain. (515 aa)
S58_68200uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (259 aa)
bchBLight-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (517 aa)
bchLProtochlorophyllide reductase iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (301 aa)
acsFMagnesium-protoporphyrin IX monomethyl ester cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. (353 aa)
S58_588705-aminolevulinate synthase. (403 aa)
S58_58860Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit. (531 aa)
S58_588504-vinyl protochlorophyllide reductase. (216 aa)
S58_56830Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (325 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (348 aa)
hemFCoproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. (295 aa)
S58_52650Tryptophan-rich sensory protein. (151 aa)
S58_49910Putative phytoene synthase. (279 aa)
S58_49900Putative phytoene dehydrogenase. (416 aa)
S58_45460Conserved hypothetical protein. (687 aa)
S58_59160Bacteriochlorophyllide reductase Z subunit. (483 aa)
S58_59050Geranylgeranyl reductase. (403 aa)
S58_59040Light harvesting pigment major facilitator family (MFS) transporter, Bch2-like protein. (444 aa)
S58_59030Bacteriochlorophyll synthase 33 kDa chain. (304 aa)
S58_590002-vinyl bacteriochlorophyllide hydratase. (196 aa)
bchNLight-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (428 aa)
S58_68170Possible transcriptional Regulator, AsnC family. (327 aa)
S58_68160Heme d1 biosynthesis protein NirG. (150 aa)
S58_68150Hypothetical protein. (158 aa)
S58_68130NirN protein. (518 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (355 aa)
S58_62300Putative membrane protein. (139 aa)
S58_603805-aminolevulinate synthase. (436 aa)
S58_60370Fe-S oxidoreductase. (512 aa)
S58_60280Hypothetical protein. (588 aa)
S58_59300Magnesium-chelatase 38 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (348 aa)
S58_59290Magnesium-chelatase 60 kDa subunit. (580 aa)
S58_59260Phytoene dehydrogenase. (512 aa)
S58_02100Conserved membrane hypothetical protein. (140 aa)
S58_03040uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. (245 aa)
S58_06110Signal peptide. (360 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (318 aa)
S58_078405-aminolevulinic acid synthase. (409 aa)
S58_09210Putative AtrB glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (459 aa)
S58_11720Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. (476 aa)
S58_13410Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (450 aa)
S58_19200Aminotransferase. (556 aa)
S58_19720Putative phytoene dehydrogenase family protein. (533 aa)
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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