STRINGSTRING
S58_68250 S58_68250 S58_01290 S58_01290 S58_01310 S58_01310 S58_01320 S58_01320 S58_01380 S58_01380 S58_01430 S58_01430 S58_02440 S58_02440 S58_02460 S58_02460 S58_02470 S58_02470 S58_02760 S58_02760 S58_03330 S58_03330 S58_03700 S58_03700 S58_06230 S58_06230 S58_07450 S58_07450 S58_07460 S58_07460 S58_09690 S58_09690 S58_14140 S58_14140 S58_17380 S58_17380 S58_17780 S58_17780 S58_21780 S58_21780 soxA soxA S58_22230 S58_22230 S58_22270 S58_22270 S58_22590 S58_22590 S58_22740 S58_22740 S58_22870 S58_22870 S58_24080 S58_24080 S58_25460 S58_25460 S58_27090 S58_27090 S58_27100 S58_27100 S58_28100 S58_28100 S58_31900 S58_31900 S58_32150 S58_32150 S58_32900 S58_32900 nuoB nuoB S58_34130 S58_34130 S58_34150 S58_34150 S58_34160 S58_34160 nuoI nuoI nuoK nuoK S58_34220 S58_34220 S58_36390 S58_36390 S58_36640 S58_36640 S58_37780 S58_37780 S58_40980 S58_40980 S58_43710 S58_43710 soxX soxX S58_49320 S58_49320 S58_51370 S58_51370 fixP fixP S58_51660 S58_51660 S58_51670 S58_51670 soxX-2 soxX-2 S58_52010 S58_52010 S58_52070 S58_52070 S58_54200 S58_54200 apt apt S58_55710 S58_55710 S58_57710 S58_57710 S58_57720 S58_57720 S58_58240 S58_58240 S58_58250 S58_58250 S58_58320 S58_58320 S58_63930 S58_63930 S58_68130 S58_68130
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
S58_68250Protease. (296 aa)
S58_01290Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (294 aa)
S58_01310Cytochrome c oxidase, cbb3-type, subunit II. (247 aa)
S58_01320Cbb3-type cytochrome oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family. (550 aa)
S58_01380Hypothetical protein. (153 aa)
S58_01430Conserved hypothetical protein. (326 aa)
S58_02440Succinate dehydrogenase cytochrome b556 subunit. (132 aa)
S58_02460Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (612 aa)
S58_02470Succinate dehydrogenase, Fe-S protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
S58_02760Conserved membrane hypothetical protein. (442 aa)
S58_03330Cytochrome C4. (193 aa)
S58_03700Cytochrome C. (123 aa)
S58_06230Putative cytochrome C. (109 aa)
S58_07450Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (268 aa)
S58_07460Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (537 aa)
S58_09690Hypothetical protein. (1142 aa)
S58_14140Putative cytochrome P460 precursor. (170 aa)
S58_17380Conserved exported hypothetical protein. (169 aa)
S58_17780Oxydoreductase, 2Fe-2S ferredoxin like subunit. (97 aa)
S58_21780Putative fumarate reductase/succinate dehydrogenase, flavoprotein subunit. (580 aa)
soxASoxA protein. (98 aa)
S58_22230Cytochrome c protein. (159 aa)
S58_22270Putative cytochrome c like protein. (116 aa)
S58_22590Ferredoxin. (77 aa)
S58_22740Ferredoxin III. (95 aa)
S58_22870Ferredoxin-like protein. (74 aa)
S58_24080Putative dimethyl sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (709 aa)
S58_25460Diheme cytochrome c-type. (306 aa)
S58_27090Formate dehydrogenase beta subunit. (518 aa)
S58_27100Formate dehydrogenase gamma subunit. (155 aa)
S58_28100Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (666 aa)
S58_31900Conserved exported hypothetical protein. (112 aa)
S58_32150Putative cytochrome P460. (194 aa)
S58_329003-oxosteroid 1-dehydrogenase. (577 aa)
nuoBNADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (196 aa)
S58_34130NADH-quinone oxidoreductase chain E. (203 aa)
S58_34150NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (441 aa)
S58_34160NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (689 aa)
nuoINADH-quinone oxidoreductase chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
nuoKNADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
S58_34220NADH dehydrogenase subunit M. (502 aa)
S58_36390Putative NADH-ubiquinone oxidoreductase subunit B17.2. (136 aa)
S58_36640Putative succinate dehydrogenase, fumarate reductase, FAD requiring protein. (471 aa)
S58_37780Putative ETC complex I subunit region protein. (101 aa)
S58_40980Signal peptide. (152 aa)
S58_43710Putative sarcosine oxidase alpha subunit. (97 aa)
soxXPutative monoheme cytochrome c sulfur oxidizing protein SoxX. (147 aa)
S58_493202-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase. (166 aa)
S58_51370Nitrate reductase, large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (897 aa)
fixPCytochrome C oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (290 aa)
S58_51660Cbb3-type cytochrome C oxidase subunit II. (244 aa)
S58_51670Cbb3-type cytochrome C oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (539 aa)
soxX-2Cytochrome C SoxX protein. (140 aa)
S58_52010Gluconate 2-dehydrogenase cytochrome c subunit precursor. (417 aa)
S58_52070Cytochrome o ubiquinol oxidase, subunit II. (282 aa)
S58_54200Putative isoquinoline 1-oxidoreductase. (1181 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (179 aa)
S58_55710Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (688 aa)
S58_57710Nitric-oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family. (448 aa)
S58_57720Nitric-oxide reductase subunit C. (150 aa)
S58_58240Cytochrome o ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (669 aa)
S58_58250Cytochrome o ubiquinol oxidase subunit II. (391 aa)
S58_58320Conserved exported hypothetical protein. (179 aa)
S58_63930Conserved hypothetical protein. (935 aa)
S58_68130NirN protein. (518 aa)
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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