STRINGSTRING
S58_70010 S58_70010 S58_01470 S58_01470 S58_02470 S58_02470 S58_18190 S58_18190 S58_21790 S58_21790 S58_22160 S58_22160 S58_22590 S58_22590 S58_22740 S58_22740 S58_22870 S58_22870 S58_24180 S58_24180 S58_27080 S58_27080 S58_30590 S58_30590 S58_30880 S58_30880 nuoI nuoI S58_42030 S58_42030 S58_42970 S58_42970 S58_51320 S58_51320 S58_51630 S58_51630 S58_55120 S58_55120 S58_63090 S58_63090 nosR nosR S58_68220 S58_68220
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
S58_70010Ferredoxin II; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (112 aa)
S58_01470Conserved hypothetical protein. (345 aa)
S58_02470Succinate dehydrogenase, Fe-S protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
S58_181902-ketoglutarate. (599 aa)
S58_21790Putative ferredoxin. (77 aa)
S58_22160Putative 4Fe-4S ferredoxin, FixG-like protein. (490 aa)
S58_22590Ferredoxin. (77 aa)
S58_22740Ferredoxin III. (95 aa)
S58_22870Ferredoxin-like protein. (74 aa)
S58_24180Conserved hypothetical protein. (984 aa)
S58_27080Formate dehydrogenase, alpha subunit. (959 aa)
S58_30590Putative pyruvate ferredoxin/flavodoxin oxidoreductase. (1163 aa)
S58_308804Fe-4S ferredoxin, iron-sulfur binding protein. (433 aa)
nuoINADH-quinone oxidoreductase chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
S58_42030Putative 4Fe-4S ferredoxin, iron-sulfur binding. (130 aa)
S58_42970Nitrogen fixation protein FixG (homologous to rdxB), with 4Fe-4S ferredoxin, iron-sulfur binding domain. (481 aa)
S58_51320Ferredoxin-type membrane protein. (363 aa)
S58_51630Nitrogen fixation protein. (488 aa)
S58_55120Putative electron transfer flavoprotein dehydrogenases; Accepts electrons from ETF and reduces ubiquinone. (552 aa)
S58_63090Glycolate oxidase iron-sulfur subunit GlcF. (444 aa)
nosRNitrous oxide reductase regulatory protein NosR. (764 aa)
S58_68220Nitrous oxide expression regulator, NosR. (692 aa)
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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