STRINGSTRING
gyrB gyrB S58_00860 S58_00860 S58_02300 S58_02300 S58_02480 S58_02480 S58_04840 S58_04840 S58_04890 S58_04890 cheA cheA S58_04990 S58_04990 S58_05780 S58_05780 S58_06030 S58_06030 S58_06370 S58_06370 S58_06380 S58_06380 S58_06780 S58_06780 S58_07810 S58_07810 S58_08020 S58_08020 S58_11160 S58_11160 S58_13450 S58_13450 S58_14250 S58_14250 S58_14530 S58_14530 S58_14590 S58_14590 S58_15270 S58_15270 S58_15320 S58_15320 S58_15460 S58_15460 S58_17040 S58_17040 cheA-2 cheA-2 S58_17120 S58_17120 S58_18610 S58_18610 S58_19120 S58_19120 S58_19320 S58_19320 S58_20560 S58_20560 S58_22490 S58_22490 S58_23810 S58_23810 S58_25800 S58_25800 S58_26410 S58_26410 S58_26660 S58_26660 S58_27140 S58_27140 S58_29140 S58_29140 S58_29410 S58_29410 S58_29690 S58_29690 S58_29850 S58_29850 S58_30600 S58_30600 S58_30690 S58_30690 S58_30810 S58_30810 S58_31190 S58_31190 S58_31200 S58_31200 S58_31410 S58_31410 S58_31540 S58_31540 S58_32190 S58_32190 S58_35330 S58_35330 S58_35860 S58_35860 S58_36360 S58_36360 S58_36370 S58_36370 S58_36560 S58_36560 S58_36580 S58_36580 parE parE S58_39080 S58_39080 S58_39180 S58_39180 S58_39770 S58_39770 S58_39780 S58_39780 S58_39890 S58_39890 S58_40650 S58_40650 S58_40960 S58_40960 S58_47640 S58_47640 S58_47770 S58_47770 S58_47950 S58_47950 S58_48760 S58_48760 S58_48890 S58_48890 S58_49140 S58_49140 S58_51480 S58_51480 S58_51700 S58_51700 S58_52930 S58_52930 S58_54480 S58_54480 S58_55360 S58_55360 S58_56970 S58_56970 S58_58200 S58_58200 S58_58380 S58_58380 S58_59710 S58_59710 S58_61980 S58_61980 S58_62150 S58_62150 mutL mutL S58_63180 S58_63180 S58_63580 S58_63580 S58_64020 S58_64020 htpG htpG S58_68020 S58_68020 S58_68310 S58_68310 S58_68790 S58_68790 S58_71290 S58_71290 S58_71580 S58_71580 S58_72120 S58_72120 S58_72540 S58_72540
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (811 aa)
S58_00860Putative sensor histidine kinase. (835 aa)
S58_02300Putative sensor histidine kinase with PAS and Response regulator receiver domains. (749 aa)
S58_02480Sensor histidine kinase. (716 aa)
S58_04840Sensor histidine kinase. (850 aa)
S58_04890Conserved hypothetical protein. (246 aa)
cheAChemotaxis protein CheA. (931 aa)
S58_04990Sensor histidine kinase with HAMP, PAS and response regulator receiver domains. (1173 aa)
S58_05780Sensor histidine kinase with a response regulator receiver domain, two-component signal transduction system. (1124 aa)
S58_06030Two-component sensor histidine kinase. (460 aa)
S58_06370Two-component system regulator. (581 aa)
S58_06380Putative sensor histidine kinase. (693 aa)
S58_06780Two-component sensor histidine kinase. (435 aa)
S58_07810Two-component hybrid sensor histidine kinase and response regulator. (296 aa)
S58_08020Putative sensor histidine kinase with PAS/PAC and response regulator receiver domains. (534 aa)
S58_11160Sensor histidine kinase. (380 aa)
S58_13450Two-component hybrid sensor and regulator. (1145 aa)
S58_14250Conserved hypothetical protein. (222 aa)
S58_14530Integral membrane sensor signal transduction histidine kinase precursor. (465 aa)
S58_14590Signal transduction histidine kinase. (368 aa)
S58_15270Putative two-component system histidine kinase. (466 aa)
S58_15320Putative two-component sensor histidine kinase. (450 aa)
S58_15460Signal transduction histidine kinase. (378 aa)
S58_17040Hypothetical protein. (220 aa)
cheA-2Chemotaxis protein CheA. (933 aa)
S58_17120Signal transduction histidine kinase. (494 aa)
S58_18610Putative sensor histidine kinase with a response regulator receiver domain. (530 aa)
S58_19120Two-component sensor histidine kinase. (469 aa)
S58_19320Two-component sensor histidine kinase. (455 aa)
S58_20560Putative two-component sensor histidine kinase. (496 aa)
S58_22490Signal transduction histidine kinase, glucose-6-phosphate specific. (448 aa)
S58_23810Putative sensor histidine kinase with multiple PAS and a response regulator receiver domain. (1299 aa)
S58_25800Putative two-component sensor histidine kinase. (477 aa)
S58_26410Hypothetical protein. (698 aa)
S58_26660Putative two-component sensor histidine kinase with multiple PAS domains and a CheY-like response regulator receiver domain. (854 aa)
S58_27140Two-component sensor histidine kinase. (774 aa)
S58_29140Putative chemotaxis protein methyltransferase. (1007 aa)
S58_29410Putative sensor histidine kinase, membrane protein. (531 aa)
S58_29690Signal transduction histidine kinase. (363 aa)
S58_29850Putative sensor histidine kinase with a response regulator receiver domain. (723 aa)
S58_30600Sensory transduction histidine kinase. (325 aa)
S58_30690Putative sensor histidine kinase with a PAS/PAC domain. (877 aa)
S58_30810Putative Sensor protein. (459 aa)
S58_31190Two-component system sensor protein. (503 aa)
S58_31200PAS/PAC sensor hybrid histidine kinase. (821 aa)
S58_31410Two-component hybrid sensor and regulator. (450 aa)
S58_31540Hypothetical protein. (828 aa)
S58_32190Sensor protein. (457 aa)
S58_35330Sensor protein. (459 aa)
S58_35860Sensor histidine kinase. (771 aa)
S58_36360Putative sensor histidine kinase with a CHASE3 and a response regulator receiver domain. (751 aa)
S58_36370Putative sensor histidine kinase with a CHASE3 and a response regulator receiver domain. (766 aa)
S58_36560Putative signal transduction histidine kinase with response regulator receiver domain. (362 aa)
S58_36580Putative two-component sensor histidine kinase. (484 aa)
parEDNA topoisomerase IV, subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (687 aa)
S58_39080Nitrogen regulation protein. (779 aa)
S58_39180Signal transduction histidine kinase, nitrogen specific, NtrB. (395 aa)
S58_39770Putative sensor histidine kinase with a GAF domain and multiple HAMP and Response regulator receiver domains. (2058 aa)
S58_39780Sensor histidine kinase. (480 aa)
S58_39890Putative two-component system histidine kinase. (541 aa)
S58_40650Putative histidine kinase with PAS/PAC motif. (675 aa)
S58_40960Sensor histidine kinase. (698 aa)
S58_47640Putative sensor histidine kinase with PAS/PAC and Response regulator receiver domains. (894 aa)
S58_47770Putative two-component sensor histidine kinase with a Hamp domain. (452 aa)
S58_47950Conserved membrane hypothetical protein. (287 aa)
S58_48760Two-component sensor histidine kinase. (486 aa)
S58_48890Putative two-component sensor histidine kinase. (459 aa)
S58_49140Sensor histidine kinase. (586 aa)
S58_51480Putative sensor histidine kinase. (504 aa)
S58_51700Sensor protein. (503 aa)
S58_52930Two-component C4-dicarboxylate transport system, sensor protein. (603 aa)
S58_54480Putative sensor histidine kinase with a response regulator receiver domain. (565 aa)
S58_55360Putative bacteriophytochrome. (847 aa)
S58_56970Signal transduction histidine kinase. (256 aa)
S58_58200Photosynthetic apparatus regulatory protein RegB. (449 aa)
S58_58380Putative sensor histidine kinase with a PAS domain. (455 aa)
S58_59710Sensory histidine kinase in two-component regulatory system wtih KdpE. (905 aa)
S58_61980Putative sensor histidine kinase (HWE family) with a GAF domain. (364 aa)
S58_62150Two-component sensor histidine kinase. (462 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (618 aa)
S58_63180Hypothetical protein. (698 aa)
S58_63580Signal transduction histidine kinase. (393 aa)
S58_64020Putative sensor histidine kinase. (561 aa)
htpGChaperone protein HtpG; Molecular chaperone. Has ATPase activity. (623 aa)
S58_68020Two-component sensor kinase. (481 aa)
S58_68310Sensor histidine kinase. (491 aa)
S58_68790Two-component sensor protein ChvG. (599 aa)
S58_71290Histidine kinase. (487 aa)
S58_71580Hypothetical protein. (322 aa)
S58_72120Putative C4-dicarboxylate transport sensor protein DctB. (613 aa)
S58_72540Sensor histidine kinase. (529 aa)
Your Current Organism:
Bradyrhizobium oligotrophicum
NCBI taxonomy Id: 1245469
Other names: Agromonas oligotrophica LMG 10732, Agromonas oligotrophica S58, B. oligotrophicum S58, Bradyrhizobium oligotrophicum S58
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